RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 STK17AQ9UEE5 414 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 CCDC39Q9UFE4 941 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 ATP6V1DQ9Y5K8 247 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 COL4A4P53420 1690 aaPredicted RBP12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 RALGAPA2Q2PPJ7 1873 aa12.53□□□□□ -0.4
TNFRSF1A-208ENST00000536194 SZT2Q5T011 3432 aa12.52□□□□□ -0.4
TNFRSF1A-208ENST00000536194 DENND3A2RUS2 1198 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TTLL13PA6NNM8 815 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 INO80B-WBP1J3KQ70 363 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 B4GALT5O43286 388 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TLL1O43897 1013 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TSPAN1O60635 241 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CA3P07451 260 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ATF7P17544 494 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TXLNAP40222 546 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SARSP49591 514 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FAM189BP81408 668 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 RAB30Q15771 203 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 E2F4Q16254 413 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 RRAGBQ5VZM2 374 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 RESP18Q5W5W9 173 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 GPR153Q6NV75 609 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SLC24A5Q71RS6 500 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TIFAQ96CG3 184 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SPATA32Q96LK8 384 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TIPINQ9BVW5 301 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CCDC113Q9H0I3 377 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 C1orf112Q9NSG2 853 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 KCND2Q9NZV8 630 aa12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PIN4Q9Y237 131 aaKnown RBP12.52□□□□□ -0.41
TNFRSF1A-208ENST00000536194 MYMKA6NI61 221 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 DGKIO75912 1065 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 IBSPP21815 317 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 STAT6P42226 847 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 NPTX2P47972 431 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 GATMP50440 423 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PEX3P56589 373 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TAP1Q03518 808 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 GIT2Q14161 759 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PPP2R5AQ15172 486 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 UBXN11Q5T124 520 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CCDC73Q6ZRK6 1079 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FAM43BQ6ZT52 329 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ECHDC2Q86YB7 292 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ZNF689Q96CS4 500 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CPB2Q96IY4 423 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 DRC1Q96MC2 740 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 RAD9AQ99638 391 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FZD8Q9H461 694 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CHST12Q9NRB3 414 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 RNF19AQ9NV58 838 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 MSRAQ9UJ68 235 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CIZ1Q9ULV3 898 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 USP20Q9Y2K6 914 aa12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 RBM19Q9Y4C8 960 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1A-208ENST00000536194 A0A0U1RQF3 1178 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 LINC01553A4QN01 128 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ERLIN2O94905 339 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 LINC00271P0C7V0 271 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PLS3P13797 630 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ZSCAN20P17040 1043 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ARF4P18085 180 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ZNF131P52739 623 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 DMP1Q13316 513 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FAM187BQ17R55 369 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ZNF697Q5TEC3 545 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PPP2R2DQ66LE6 453 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ADALQ6DHV7 355 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PPP4R3CPQ6ZMV5 832 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TAS1R3Q7RTX0 852 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ZNF598Q86UK7 904 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 DEPTORQ8TB45 409 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 DHX58Q96C10 678 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 IFT74Q96LB3 600 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FAM161BQ96MY7 647 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 YME1L1Q96TA2 773 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TRAIPQ9BWF2 469 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SCAND2PQ9GZW5 306 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SEMA6BQ9H3T3 888 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ZNF576Q9H609 170 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ARHGAP28Q9P2N2 729 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ODF2LQ9ULJ1 636 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 INSL6Q9Y581 213 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ATG2AQ2TAZ0 1938 aa12.5□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CNTNAP2Q9UHC6 1331 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TMEM265A0A087WTH1 108 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CCDC169A6NNP5 214 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 MEIS3P2A8K0S8 358 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SLC16A4O15374 487 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PRKCBP05771 671 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 FGFR1P11362 822 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 PCBP1Q15365 356 aaKnown RBP eCLIP12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 TWF2Q6IBS0 349 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 SV2BQ7L1I2 683 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 DYMQ7RTS9 669 aa12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 CDR2LQ86X02 465 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-208ENST00000536194 ZBTB8OSQ8IWT0 167 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms