RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 ZDHHC14Q8IZN3 488 aa20.23■□□□□ 0.83
CHPF-203ENST00000535926 MDM1Q8TC05 714 aa20.23■□□□□ 0.83
CHPF-203ENST00000535926 KRT35Q92764 455 aa20.23■□□□□ 0.83
CHPF-203ENST00000535926 PCIF1Q9H4Z3 704 aa20.23■□□□□ 0.83
CHPF-203ENST00000535926 DIS3Q9Y2L1 958 aaKnown RBP20.23■□□□□ 0.83
CHPF-203ENST00000535926 DAAM1Q9Y4D1 1078 aa20.23■□□□□ 0.83
CHPF-203ENST00000535926 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
CHPF-203ENST00000535926 CAND2O75155 1236 aa20.22■□□□□ 0.83
CHPF-203ENST00000535926 MARCKSL1P49006 195 aa20.22■□□□□ 0.83
CHPF-203ENST00000535926 MAPK7Q13164 816 aa20.22■□□□□ 0.83
CHPF-203ENST00000535926 CEP55Q53EZ4 464 aa20.22■□□□□ 0.83
CHPF-203ENST00000535926 RAB17Q9H0T7 212 aa20.22■□□□□ 0.83
CHPF-203ENST00000535926 UBE2TQ9NPD8 197 aaPredicted RBP20.22■□□□□ 0.83
CHPF-203ENST00000535926 GGA2Q9UJY4 613 aa20.22■□□□□ 0.83
CHPF-203ENST00000535926 SNX24Q9Y343 169 aa20.22■□□□□ 0.83
CHPF-203ENST00000535926 ANKRD31Q8N7Z5 1873 aa20.22■□□□□ 0.83
CHPF-203ENST00000535926 HIP1RO75146 1068 aa20.22■□□□□ 0.83
CHPF-203ENST00000535926 NPM3O75607 178 aaKnown RBP20.22■□□□□ 0.83
CHPF-203ENST00000535926 ARHGEF19Q8IW93 802 aa20.22■□□□□ 0.83
CHPF-203ENST00000535926 SYCP3Q8IZU3 236 aa20.22■□□□□ 0.83
CHPF-203ENST00000535926 ZNF577Q9BSK1 485 aa20.22■□□□□ 0.83
CHPF-203ENST00000535926 ECE2O60344 883 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 FTLP02792 175 aaPredicted RBP20.21■□□□□ 0.83
CHPF-203ENST00000535926 POLR2MP0CAP2 368 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 PLTPP55058 493 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 SPRED3Q2MJR0 410 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 UBAP2Q5T6F2 1119 aaKnown RBP20.21■□□□□ 0.83
CHPF-203ENST00000535926 ZDHHC24Q6UX98 284 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 JAMLQ86YT9 394 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 ZSWIM2Q8NEG5 633 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 TLCD1Q96CP7 247 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 C18orf8Q96DM3 657 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 PRMT6Q96LA8 375 aaPredicted RBP20.21■□□□□ 0.83
CHPF-203ENST00000535926 CSRNP1Q96S65 589 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 LXNQ9BS40 222 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 ODF2LQ9ULJ1 636 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 NRXN2Q9P2S2 1712 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 H0YHG0 523 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 CCDC172P0C7W6 258 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 PPP3CAQ08209 521 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 IFFO1Q0D2I5 559 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 FBXO25Q8TCJ0 367 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 ZNF622Q969S3 477 aaKnown RBP eCLIP20.21■□□□□ 0.83
CHPF-203ENST00000535926 TMX4Q9H1E5 349 aaPredicted RBP20.21■□□□□ 0.83
CHPF-203ENST00000535926 UBE4BO95155 1302 aa20.21■□□□□ 0.83
CHPF-203ENST00000535926 PHF20L1A8MW92 1017 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 KIAA0391O15091 583 aaKnown RBP20.2■□□□□ 0.82
CHPF-203ENST00000535926 PAEPP09466 180 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 ACTN3Q08043 901 aaPredicted RBP20.2■□□□□ 0.82
CHPF-203ENST00000535926 BYSLQ13895 437 aaKnown RBP20.2■□□□□ 0.82
CHPF-203ENST00000535926 B3GNT9Q6UX72 402 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 SLC9A9Q8IVB4 645 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 RNF25Q96BH1 459 aaPredicted RBP20.2■□□□□ 0.82
CHPF-203ENST00000535926 PSMD1Q99460 953 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 ZNF219Q9P2Y4 722 aaPredicted RBP20.2■□□□□ 0.82
CHPF-203ENST00000535926 SERPINA10Q9UK55 444 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 EMSYQ7Z589 1322 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 TRIM37O94972 964 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 VIL1P09327 827 aaKnown RBP20.2■□□□□ 0.82
CHPF-203ENST00000535926 PTGIRP43119 386 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 ZNF746Q6NUN9 644 aaPredicted RBP20.2■□□□□ 0.82
CHPF-203ENST00000535926 STXBP4Q6ZWJ1 553 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 KAT5Q92993 513 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 MASTLQ96GX5 879 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 NAP1L3Q99457 506 aaPredicted RBP20.2■□□□□ 0.82
CHPF-203ENST00000535926 OSBPL7Q9BZF2 842 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 GOPCQ9HD26 462 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 CTTNBP2NLQ9P2B4 639 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 PNMA2Q9UL42 364 aa20.2■□□□□ 0.82
CHPF-203ENST00000535926 GOLGA6L10A0A0M3HER8 536 aa20.19■□□□□ 0.82
CHPF-203ENST00000535926 PRELID2Q8N945 189 aa20.19■□□□□ 0.82
CHPF-203ENST00000535926 SEC16BQ96JE7 1060 aa20.19■□□□□ 0.82
CHPF-203ENST00000535926 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.19■□□□□ 0.82
CHPF-203ENST00000535926 TMEM110-MUSTN1A8MSY1 372 aa20.19■□□□□ 0.82
CHPF-203ENST00000535926 DDX39AO00148 427 aaKnown RBP20.19■□□□□ 0.82
CHPF-203ENST00000535926 GCLMP48507 274 aa20.19■□□□□ 0.82
CHPF-203ENST00000535926 C1orf220Q5T0J3 134 aa20.19■□□□□ 0.82
CHPF-203ENST00000535926 SAMD1Q6SPF0 538 aaPredicted RBP20.19■□□□□ 0.82
CHPF-203ENST00000535926 CCDC13Q8IYE1 715 aa20.19■□□□□ 0.82
CHPF-203ENST00000535926 PCDHB18PQ96TA0 734 aa20.19■□□□□ 0.82
CHPF-203ENST00000535926 VCPKMTQ9H867 229 aa20.19■□□□□ 0.82
CHPF-203ENST00000535926 ACP6Q9NPH0 428 aa20.19■□□□□ 0.82
CHPF-203ENST00000535926 KCND2Q9NZV8 630 aa20.19■□□□□ 0.82
CHPF-203ENST00000535926 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.19■□□□□ 0.82
CHPF-203ENST00000535926 KRT13P13646 458 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 PMS2P54278 862 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 TTC27Q6P3X3 843 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 CPNE8Q86YQ8 564 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 RHOT2Q8IXI1 618 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 PLCD3Q8N3E9 789 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 CBWD1Q9BRT8 395 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 PABPC3Q9H361 631 aaKnown RBP20.18■□□□□ 0.82
CHPF-203ENST00000535926 GRHL1Q9NZI5 618 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 ATRNL1Q5VV63 1379 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 ARHGEF35A5YM69 484 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 C5orf60A6NFR6 353 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 FAM187AA6NFU0 413 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 IPO5O00410 1097 aaKnown RBP20.18■□□□□ 0.82
CHPF-203ENST00000535926 BCRP11274 1271 aa20.18■□□□□ 0.82
CHPF-203ENST00000535926 HADHBP55084 474 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms