RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 ODR4Q5SWX8 454 aa13.33□□□□□ -0.28
CHD4-203ENST00000535717 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHD4-203ENST00000535717 DYMQ7RTS9 669 aa13.33□□□□□ -0.28
CHD4-203ENST00000535717 DEPTORQ8TB45 409 aa13.33□□□□□ -0.28
CHD4-203ENST00000535717 DNAJC19Q96DA6 116 aa13.33□□□□□ -0.28
CHD4-203ENST00000535717 KIFC3Q9BVG8 833 aa13.33□□□□□ -0.28
CHD4-203ENST00000535717 TNMDQ9H2S6 317 aa13.33□□□□□ -0.28
CHD4-203ENST00000535717 C17orf75Q9HAS0 396 aa13.33□□□□□ -0.28
CHD4-203ENST00000535717 MAGEF1Q9HAY2 307 aa13.33□□□□□ -0.28
CHD4-203ENST00000535717 ADGRA3Q8IWK6 1321 aa13.33□□□□□ -0.28
CHD4-203ENST00000535717 MICAL3Q7RTP6 2002 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.32□□□□□ -0.28
CHD4-203ENST00000535717 A0A1W2PPC1 479 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 CCDC169A6NNP5 214 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 INO80B-WBP1J3KQ70 363 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 EFCAB14O75071 495 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 TBCAO75347 108 aaKnown RBP13.32□□□□□ -0.28
CHD4-203ENST00000535717 FAM13AO94988 1023 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 DEFB103AP81534 67 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 DMP1Q13316 513 aaPredicted RBP13.32□□□□□ -0.28
CHD4-203ENST00000535717 AMHR2Q16671 573 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 CATSPER4Q7RTX7 472 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 ZBTB8OSQ8IWT0 167 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 GRAMD1CQ8IYS0 662 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 CEP57L1Q8IYX8 460 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 SPIRE2Q8WWL2 714 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 NTPCRQ9BSD7 190 aaKnown RBP13.32□□□□□ -0.28
CHD4-203ENST00000535717 FTHL17Q9BXU8 183 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 CCDC113Q9H0I3 377 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 C2orf40Q9H1Z8 148 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 TSPYL2Q9H2G4 693 aaPredicted RBP13.32□□□□□ -0.28
CHD4-203ENST00000535717 MTIF3Q9H2K0 278 aaKnown RBP13.32□□□□□ -0.28
CHD4-203ENST00000535717 ZHX3Q9H4I2 956 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 PARVGQ9HBI0 331 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 USP25Q9UHP3 1055 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 SLC4A7Q9Y6M7 1214 aa13.32□□□□□ -0.28
CHD4-203ENST00000535717 MYH11P35749 1972 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 SLC16A4O15374 487 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 TSPAN1O60635 241 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 ZNF202O95125 648 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 CASP1P29466 404 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 DEKP35659 375 aaKnown RBP13.31□□□□□ -0.28
CHD4-203ENST00000535717 AFMP43652 599 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 KCNJ6P48051 423 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 EFNA5P52803 228 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 AMPD3Q01432 767 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 FAM109BQ6ICB4 259 aaPredicted RBP13.31□□□□□ -0.28
CHD4-203ENST00000535717 FAM43BQ6ZT52 329 aaPredicted RBP13.31□□□□□ -0.28
CHD4-203ENST00000535717 TMCO2Q7Z6W1 182 aaPredicted RBP13.31□□□□□ -0.28
CHD4-203ENST00000535717 FMR1NBQ8N0W7 255 aaPredicted RBP13.31□□□□□ -0.28
CHD4-203ENST00000535717 MYCT1Q8N699 235 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 ENGASEQ8NFI3 743 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 PAGE5Q96GU1 130 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 ADAM2Q99965 735 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 C7orf25Q9BPX7 421 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 TRIM9Q9C026 710 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 LRRC27Q9C0I9 530 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 FZD8Q9H461 694 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 KMT5AQ9NQR1 393 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 AGPAT5Q9NUQ2 364 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 LARSQ9P2J5 1176 aaKnown RBP13.31□□□□□ -0.28
CHD4-203ENST00000535717 ARHGAP28Q9P2N2 729 aa13.31□□□□□ -0.28
CHD4-203ENST00000535717 CHD9Q3L8U1 2897 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.3□□□□□ -0.28
CHD4-203ENST00000535717 FRMD3A2A2Y4 597 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 DENND3A2RUS2 1198 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 GRXCR1A8MXD5 290 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 B4GALT5O43286 388 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 PRPF40AO75400 957 aaKnown RBP13.3□□□□□ -0.28
CHD4-203ENST00000535717 ERLIN2O94905 339 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 AMHP03971 560 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 EDN1P05305 212 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 ATP2A2P16615 1042 aaKnown RBP13.3□□□□□ -0.28
CHD4-203ENST00000535717 HOXA11P31270 313 aaPredicted RBP13.3□□□□□ -0.28
CHD4-203ENST00000535717 SMTNP53814 917 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 FAM160A1Q05DH4 1040 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 SNW1Q13573 536 aaKnown RBP13.3□□□□□ -0.28
CHD4-203ENST00000535717 PCBP1Q15365 356 aaKnown RBP eCLIP13.3□□□□□ -0.284e-12■■■■□ 25.3
CHD4-203ENST00000535717 FAM187BQ17R55 369 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 CNNM4Q6P4Q7 775 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 KRBA2Q6ZNG9 492 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 TAS1R3Q7RTX0 852 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 TMEM161BQ8NDZ6 487 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 FIZ1Q96SL8 496 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 BLZF1Q9H2G9 400 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 CHST12Q9NRB3 414 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 RGS18Q9NS28 235 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 PRMT7Q9NVM4 692 aaPredicted RBP13.3□□□□□ -0.28
CHD4-203ENST00000535717 KCNG1Q9UIX4 513 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 PIN4Q9Y237 131 aaKnown RBP13.3□□□□□ -0.28
CHD4-203ENST00000535717 USP20Q9Y2K6 914 aa13.3□□□□□ -0.28
CHD4-203ENST00000535717 PTPRSQ13332 1948 aa13.29□□□□□ -0.28
CHD4-203ENST00000535717 TTLL13PA6NNM8 815 aa13.29□□□□□ -0.28
CHD4-203ENST00000535717 C9IYK1 514 aa13.29□□□□□ -0.28
CHD4-203ENST00000535717 K7ERI5 159 aa13.29□□□□□ -0.28
CHD4-203ENST00000535717 TRAK2O60296 914 aa13.29□□□□□ -0.28
CHD4-203ENST00000535717 PRKCBP05771 671 aa13.29□□□□□ -0.28
CHD4-203ENST00000535717 MAPTP10636 758 aaKnown RBP13.29□□□□□ -0.28
CHD4-203ENST00000535717 IDEP14735 1019 aa13.29□□□□□ -0.28
CHD4-203ENST00000535717 ZSCAN20P17040 1043 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms