RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 CARNS1A5YM72 827 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 TMEM150BA6NC51 233 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 ASAP2O43150 1006 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 ZNF623O75123 536 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 SLITRK3O94933 977 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 SKIP12755 728 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 LAG3P18627 525 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 SFPQP23246 707 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCDC60-202ENST00000535685 DNAJB1P25685 340 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 PLCB3Q01970 1234 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 ORC2Q13416 577 aaPredicted RBP12.07□□□□□ -0.48
CCDC60-202ENST00000535685 ADAM15Q13444 863 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 C8orf34Q49A92 452 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 ARSIQ5FYB1 569 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 SRGAP1Q7Z6B7 1085 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 FAM178BQ8IXR5 827 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 COLGALT1Q8NBJ5 622 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 POF1BQ8WVV4 589 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 SLC7A3Q8WY07 619 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 ZDHHC16Q969W1 377 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 NECAB3Q96P71 396 aaPredicted RBP12.07□□□□□ -0.48
CCDC60-202ENST00000535685 FDXACB1Q9BRP7 624 aaPredicted RBP12.07□□□□□ -0.48
CCDC60-202ENST00000535685 LXNQ9BS40 222 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 IFT122Q9HBG6 1241 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 SH2B1Q9NRF2 756 aaPredicted RBP12.07□□□□□ -0.48
CCDC60-202ENST00000535685 TYW1Q9NV66 732 aaKnown RBP12.07□□□□□ -0.48
CCDC60-202ENST00000535685 PRKAG3Q9UGI9 489 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 PCDHA12Q9UN75 941 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 FAM50BQ9Y247 325 aa12.07□□□□□ -0.48
CCDC60-202ENST00000535685 FSCN2O14926 492 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 MARCH6O60337 910 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 DTNBO60941 627 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 FGFR1P11362 822 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 XRCC6P12956 609 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCDC60-202ENST00000535685 HOXB3P14651 431 aaPredicted RBP12.06□□□□□ -0.48
CCDC60-202ENST00000535685 ATF7P17544 494 aaPredicted RBP12.06□□□□□ -0.48
CCDC60-202ENST00000535685 YWHABP31946 246 aaKnown RBP12.06□□□□□ -0.48
CCDC60-202ENST00000535685 PHKA2P46019 1235 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 RBM25P49756 843 aaKnown RBP12.06□□□□□ -0.48
CCDC60-202ENST00000535685 NPEPPSP55786 919 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 HMGN5P82970 282 aaKnown RBP12.06□□□□□ -0.48
CCDC60-202ENST00000535685 POU5F1BQ06416 359 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 PCBP1Q15365 356 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCDC60-202ENST00000535685 CALCRLQ16602 461 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 C6orf132Q5T0Z8 1188 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 PLA2G4FQ68DD2 849 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 PTCRAQ6ISU1 281 aaPredicted RBP12.06□□□□□ -0.48
CCDC60-202ENST00000535685 LRRC55Q6ZSA7 311 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 RHPN2Q8IUC4 686 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 LRRC43Q8N309 656 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 EFHBQ8N7U6 833 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 TCP11Q8WWU5 503 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 PSPC1Q8WXF1 523 aaKnown RBP12.06□□□□□ -0.48
CCDC60-202ENST00000535685 KHSRPQ92945 711 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCDC60-202ENST00000535685 CEP170P1Q96L14 293 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 SCLT1Q96NL6 688 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 FOXP1Q9H334 677 aaPredicted RBP12.06□□□□□ -0.48
CCDC60-202ENST00000535685 ANKEF1Q9NU02 776 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 RGL1Q9NZL6 768 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 COL4A3BPQ9Y5P4 624 aa12.06□□□□□ -0.48
CCDC60-202ENST00000535685 NEMFO60524 1076 aa12.05□□□□□ -0.48
CCDC60-202ENST00000535685 FGF18O76093 207 aa12.05□□□□□ -0.48
CCDC60-202ENST00000535685 CLCN1P35523 988 aa12.05□□□□□ -0.48
CCDC60-202ENST00000535685 PPM1AP35813 382 aa12.05□□□□□ -0.48
CCDC60-202ENST00000535685 RAB27AP51159 221 aa12.05□□□□□ -0.48
CCDC60-202ENST00000535685 POLGP54098 1239 aaPredicted RBP12.05□□□□□ -0.48
CCDC60-202ENST00000535685 SAFBQ15424 915 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCDC60-202ENST00000535685 CLLU1OSQ5K130 101 aa12.05□□□□□ -0.48
CCDC60-202ENST00000535685 NCAPH2Q6IBW4 605 aa12.05□□□□□ -0.48
CCDC60-202ENST00000535685 FBXO18Q8NFZ0 1043 aa12.05□□□□□ -0.48
CCDC60-202ENST00000535685 DYDC2Q96IM9 177 aa12.05□□□□□ -0.48
CCDC60-202ENST00000535685 ZNF668Q96K58 619 aaPredicted RBP12.05□□□□□ -0.48
CCDC60-202ENST00000535685 CDCA3Q99618 268 aaPredicted RBP12.05□□□□□ -0.48
CCDC60-202ENST00000535685 EIF2AK1Q9BQI3 630 aaKnown RBP12.05□□□□□ -0.48
CCDC60-202ENST00000535685 SH2D3AQ9BRG2 576 aa12.05□□□□□ -0.48
CCDC60-202ENST00000535685 MRPL9Q9BYD2 267 aaKnown RBP12.05□□□□□ -0.48
CCDC60-202ENST00000535685 TTC12Q9H892 705 aaPredicted RBP12.05□□□□□ -0.48
CCDC60-202ENST00000535685 TLR9Q9NR96 1032 aa12.05□□□□□ -0.48
CCDC60-202ENST00000535685 CLDND1Q9NY35 253 aa12.05□□□□□ -0.48
CCDC60-202ENST00000535685 C5orf42Q9H799 3197 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 H3BQ06 376 aaPredicted RBP12.04□□□□□ -0.48
CCDC60-202ENST00000535685 WNT7AO00755 349 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 CSDE1O75534 798 aaKnown RBP12.04□□□□□ -0.48
CCDC60-202ENST00000535685 EYA4O95677 639 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 IL9P15248 144 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 FGFR4P22455 802 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 IRS1P35568 1242 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 TRAPPC10P48553 1259 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 LAMTOR4Q0VGL1 99 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 CTTNQ14247 550 aaKnown RBP12.04□□□□□ -0.48
CCDC60-202ENST00000535685 MXD4Q14582 209 aaPredicted RBP12.04□□□□□ -0.48
CCDC60-202ENST00000535685 EMC2Q15006 297 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 XKR9Q5GH70 373 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 SPOUT1Q5T280 376 aaKnown RBP12.04□□□□□ -0.48
CCDC60-202ENST00000535685 KCNT2Q6UVM3 1135 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 MRPL10Q7Z7H8 261 aaKnown RBP12.04□□□□□ -0.48
CCDC60-202ENST00000535685 FERMT3Q86UX7 667 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 ABI1Q8IZP0 508 aa12.04□□□□□ -0.48
CCDC60-202ENST00000535685 PRPF31Q8WWY3 499 aaKnown RBP12.04□□□□□ -0.48
CCDC60-202ENST00000535685 MRPS27Q92552 414 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms