RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 SAFBQ15424 915 aaKnown RBP eCLIP9.53□□□□□ -0.884e-7■■■■□ 21.8
SFSWAP-202ENST00000535202 CSPP1Q1MSJ5 1256 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 CTC1Q2NKJ3 1217 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 LONRF3Q496Y0 759 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 ZSCAN30Q86W11 494 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 FAM178BQ8IXR5 827 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 EXOC8Q8IYI6 725 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 GJD3Q8N144 294 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 PSPC1Q8WXF1 523 aaKnown RBP9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 LPPQ93052 612 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 C8orf76Q96K31 380 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 MTRQ99707 1265 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 EIF2AK1Q9BQI3 630 aaKnown RBP9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 EPHX3Q9H6B9 360 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 DHX33Q9H6R0 707 aaKnown RBP9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 TTC12Q9H892 705 aaPredicted RBP9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 CD320Q9NPF0 282 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 CHST12Q9NRB3 414 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 CHMP5Q9NZZ3 219 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 PCDHA12Q9UN75 941 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 PPME1Q9Y570 386 aa9.53□□□□□ -0.88
SFSWAP-202ENST00000535202 POTEMA6NI47 508 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 PER2O15055 1255 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 MBTPS2O43462 519 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 GAS2O43903 313 aaKnown RBP9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 SLITRK3O94933 977 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 EOMESO95936 686 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 SRGAP2CP0DJJ0 459 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 MCM7P33993 719 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 PHKA2P46019 1235 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 ERVFC1P60507 584 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 LAMTOR4Q0VGL1 99 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 ADAM15Q13444 863 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 PLPP4Q5VZY2 271 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 KCNT2Q6UVM3 1135 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 ZNF598Q86UK7 904 aaKnown RBP9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 EFHBQ8N7U6 833 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 FAM184AQ8NB25 1140 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 RNF149Q8NC42 400 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 TCP11Q8WWU5 503 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 PRPF31Q8WWY3 499 aaKnown RBP9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 MRPS27Q92552 414 aaKnown RBP9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 KHSRPQ92945 711 aaKnown RBP eCLIP9.52□□□□□ -0.891e-8■□□□□ 11.3
SFSWAP-202ENST00000535202 CCDC43Q96MW1 224 aaKnown RBP9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 ZNF558Q96NG5 402 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 C1QTNF1Q9BXJ1 281 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 MRPL9Q9BYD2 267 aaKnown RBP9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 TMEM60Q9H2L4 133 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 TLE6Q9H808 572 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 IFT122Q9HBG6 1241 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 ENTPD7Q9NQZ7 604 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 AGPAT5Q9NUQ2 364 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 FAM105AQ9NUU6 356 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 CD207Q9UJ71 328 aa9.52□□□□□ -0.89
SFSWAP-202ENST00000535202 FSCN2O14926 492 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 TRAK2O60296 914 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 SKIP12755 728 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 COL9A1P20849 921 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 PPM1AP35813 382 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 RAB27AP51159 221 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 HMGN5P82970 282 aaKnown RBP9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 PLCB3Q01970 1234 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 KRT17Q04695 432 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 SMAD4Q13485 552 aaKnown RBP9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 GNL2Q13823 731 aaKnown RBP9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 SRGAP1Q7Z6B7 1085 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 FERMT3Q86UX7 667 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 ZSCAN31Q96LW9 406 aaPredicted RBP9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 MTMR9Q96QG7 549 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 KIF2CQ99661 725 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 TCF25Q9BQ70 676 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 LLPHQ9BRT6 129 aaKnown RBP9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 MINDY3Q9H8M7 445 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 UPF2Q9HAU5 1272 aaKnown RBP9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 SH2B1Q9NRF2 756 aaPredicted RBP9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 SPG21Q9NZD8 308 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 PUF60Q9UHX1 559 aaKnown RBP9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 CIZ1Q9ULV3 898 aaPredicted RBP9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 BARX2Q9UMQ3 279 aaPredicted RBP9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 LZTS1Q9Y250 596 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 INPP5FQ9Y2H2 1132 aa9.51□□□□□ -0.89
SFSWAP-202ENST00000535202 A0A087WWV3 80 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 FAM86C2PA6NEL3 165 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 MEIS3P2A8K0S8 358 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 NT5C1B-RDH14C9J2C7 533 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 ASAP2O43150 1006 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 ZNF500O60304 480 aaPredicted RBP9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 ZC3H11AO75152 810 aaKnown RBP eCLIP9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 ERLIN2O94905 339 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 LETM1O95202 739 aaPredicted RBP9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 LYPLA2O95372 231 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 GLP2RO95838 553 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 CA8P35219 290 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 BCAR1P56945 870 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 ZP2Q05996 745 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 TFDP1Q14186 410 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 ZNF174Q15697 407 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 SMAD2Q15796 467 aaKnown RBP9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 DUSP6Q16828 381 aa9.5□□□□□ -0.89
SFSWAP-202ENST00000535202 PDE12Q6L8Q7 609 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms