RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 FDXACB1Q9BRP7 624 aaPredicted RBP14.07□□□□□ -0.16
USF1-211ENST00000534633 NR2E1Q9Y466 385 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 HCFC2Q9Y5Z7 792 aa14.07□□□□□ -0.16
USF1-211ENST00000534633 TMEM150BA6NC51 233 aa14.06□□□□□ -0.16
USF1-211ENST00000534633 ST18O60284 1047 aa14.06□□□□□ -0.16
USF1-211ENST00000534633 RAB27AP51159 221 aa14.06□□□□□ -0.16
USF1-211ENST00000534633 PTPN5P54829 565 aa14.06□□□□□ -0.16
USF1-211ENST00000534633 NONOQ15233 471 aaKnown RBP eCLIP14.06□□□□□ -0.16
USF1-211ENST00000534633 CES5AQ6NT32 575 aa14.06□□□□□ -0.16
USF1-211ENST00000534633 CPLX2Q6PUV4 134 aaKnown RBP14.06□□□□□ -0.16
USF1-211ENST00000534633 RHPN2Q8IUC4 686 aa14.06□□□□□ -0.16
USF1-211ENST00000534633 PRSS33Q8NF86 280 aa14.06□□□□□ -0.16
USF1-211ENST00000534633 ASIC4Q96FT7 647 aa14.06□□□□□ -0.16
USF1-211ENST00000534633 TMX3Q96JJ7 454 aa14.06□□□□□ -0.16
USF1-211ENST00000534633 NECTIN4Q96NY8 510 aa14.06□□□□□ -0.16
USF1-211ENST00000534633 APOL5Q9BWW9 433 aa14.06□□□□□ -0.16
USF1-211ENST00000534633 SUCLA2Q9P2R7 463 aaPredicted RBP14.06□□□□□ -0.16
USF1-211ENST00000534633 DDX25Q9UHL0 483 aaKnown RBP14.06□□□□□ -0.16
USF1-211ENST00000534633 PIN4Q9Y237 131 aaKnown RBP14.06□□□□□ -0.16
USF1-211ENST00000534633 STK36Q9NRP7 1315 aa14.06□□□□□ -0.16
USF1-211ENST00000534633 TDRD15B5MCY1 1934 aaKnown RBP14.05□□□□□ -0.16
USF1-211ENST00000534633 DDX11L8A8MPP1 907 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 NT5C1B-RDH14C9J2C7 533 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 CLASP2O75122 1294 aaKnown RBP14.05□□□□□ -0.16
USF1-211ENST00000534633 ZNF623O75123 536 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 ZC3H11AO75152 810 aaKnown RBP eCLIP14.05□□□□□ -0.16
USF1-211ENST00000534633 CDKL5O76039 1030 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 CXCL14O95715 111 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 POLGP54098 1239 aaPredicted RBP14.05□□□□□ -0.16
USF1-211ENST00000534633 PSMC5P62195 406 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 GIT2Q14161 759 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 IER5LQ5T953 404 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 GLB1LQ6UWU2 654 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 ANO5Q75V66 913 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 KRT25Q7Z3Z0 450 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 VPS52Q8N1B4 723 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 SH2D3AQ9BRG2 576 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 ZBP1Q9H171 429 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 ADAM7Q9H2U9 754 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 SH2B1Q9NRF2 756 aaPredicted RBP14.05□□□□□ -0.16
USF1-211ENST00000534633 FAM105AQ9NUU6 356 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 ORC3Q9UBD5 711 aaPredicted RBP14.05□□□□□ -0.16
USF1-211ENST00000534633 IRAK3Q9Y616 596 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 C2orf16Q68DN1 1984 aa14.05□□□□□ -0.16
USF1-211ENST00000534633 DKC1O60832 514 aaKnown RBP eCLIP14.04□□□□□ -0.16
USF1-211ENST00000534633 CA8P35219 290 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 MTHFRP42898 656 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 PPP2R5CQ13362 524 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 INF2Q27J81 1249 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 NOMO2Q5JPE7 1267 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 CATSPER4Q7RTX7 472 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 ZBTB33Q86T24 672 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 DDX53Q86TM3 631 aaKnown RBP14.04□□□□□ -0.16
USF1-211ENST00000534633 LPPQ93052 612 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 RIPOR3Q96MK2 946 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 FAM20AQ96MK3 541 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 NLRP4Q96MN2 994 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 POMKQ9H5K3 350 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 NRDE2Q9H7Z3 1164 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 CYP26B1Q9NR63 512 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 TBC1D13Q9NVG8 400 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 DZANK1Q9NVP4 752 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 KCNJ14Q9UNX9 436 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 PPME1Q9Y570 386 aa14.04□□□□□ -0.16
USF1-211ENST00000534633 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.03□□□□□ -0.16
USF1-211ENST00000534633 EML1O00423 815 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 SLC37A4O43826 429 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 CTSAP10619 480 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 GCFC2P16383 781 aaKnown RBP14.03□□□□□ -0.16
USF1-211ENST00000534633 SP100P23497 879 aaPredicted RBP14.03□□□□□ -0.16
USF1-211ENST00000534633 QARSP47897 775 aaKnown RBP14.03□□□□□ -0.16
USF1-211ENST00000534633 RNASELQ05823 741 aaKnown RBP14.03□□□□□ -0.16
USF1-211ENST00000534633 TMEM173Q86WV6 379 aaPredicted RBP14.03□□□□□ -0.16
USF1-211ENST00000534633 KSR1Q8IVT5 923 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 EXOC8Q8IYI6 725 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 UBALD2Q8IYN6 164 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 TMEM87AQ8NBN3 555 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 SLC7A3Q8WY07 619 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 PGBD4Q96DM1 585 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 IGSF21Q96ID5 467 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 LLPHQ9BRT6 129 aaKnown RBP14.03□□□□□ -0.16
USF1-211ENST00000534633 PHF20Q9BVI0 1012 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 IFT122Q9HBG6 1241 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 KCNMB3Q9NPA1 279 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 TSHZ2Q9NRE2 1034 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 AGPAT5Q9NUQ2 364 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 CDH22Q9UJ99 828 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 VAV3Q9UKW4 847 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 SORCS3Q9UPU3 1222 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 COL4A3BPQ9Y5P4 624 aa14.03□□□□□ -0.16
USF1-211ENST00000534633 CCDC194A0A1B0GVG4 234 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 MEIS3P2A8K0S8 358 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 C2CD4DB7Z1M9 353 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 OFD1O75665 1012 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 P4HBP07237 508 aaKnown RBP14.02□□□□□ -0.17
USF1-211ENST00000534633 GALTP07902 379 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 TCF15Q12870 199 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 LETM2Q2VYF4 491 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 LONRF3Q496Y0 759 aa14.02□□□□□ -0.17
USF1-211ENST00000534633 PLA2G4FQ68DD2 849 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms