RNA–Protein interactions for RNA: ENST00000534581.1

C11orf49-222, Transcript of chromosome 11 open reading frame 49, human

TSL 3

Gene C11orf49, Length 542 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C11orf49-222	ENST00000534581	ENGASE	Q8NFI3	743 aa		18.82	■□□□□ 0.6
C11orf49-222	ENST00000534581	APBB2	Q92870	758 aa		18.82	■□□□□ 0.6
C11orf49-222	ENST00000534581	DNAJC19	Q96DA6	116 aa		18.82	■□□□□ 0.6
C11orf49-222	ENST00000534581	LMBRD1	Q9NUN5	540 aa		18.82	■□□□□ 0.6
C11orf49-222	ENST00000534581	KAT6A	Q92794	2004 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	ALPK3	Q96L96	1907 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581		K7ENM7	598 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	GTPBP6	O43824	516 aa	Predicted RBP	18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	TRAK2	O60296	914 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	IBSP	P21815	317 aa	Predicted RBP	18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	EFNA5	P52803	228 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	IKBKE	Q14164	716 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	OTOP2	Q7RTS6	562 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	SFR1	Q86XK3	245 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	SPIRE2	Q8WWL2	714 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	NFKBIZ	Q9BYH8	718 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	MINDY3	Q9H8M7	445 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	MRPL44	Q9H9J2	332 aa	Known RBP	18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	ERVK-5	Q9HDB9	667 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	DACT1	Q9NYF0	836 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	TBC1D7	Q9P0N9	293 aa		18.81	■□□□□ 0.6
C11orf49-222	ENST00000534581	DENND3	A2RUS2	1198 aa		18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581		H0YCG3	227 aa		18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581		K7ERI5	159 aa		18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	MYL1	P05976	194 aa		18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	ZSCAN20	P17040	1043 aa	Predicted RBP	18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	ZNF131	P52739	623 aa		18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	MBTD1	Q05BQ5	628 aa		18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	MAPK6	Q16659	721 aa		18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	CDCA2	Q69YH5	1023 aa	Predicted RBP	18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	C16orf59	Q7L2K0	433 aa		18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	CCDC47	Q96A33	483 aa	Known RBP	18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	TIGD1	Q96MW7	591 aa		18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	MTIF3	Q9H2K0	278 aa	Known RBP	18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	PRMT7	Q9NVM4	692 aa	Predicted RBP	18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	SEL1L	Q9UBV2	794 aa		18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	PIN4	Q9Y237	131 aa	Known RBP	18.8	■□□□□ 0.6
C11orf49-222	ENST00000534581	TRIP12	Q14669	1992 aa	Predicted RBP	18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	PRKCB	P05771	671 aa		18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	PRR29	P0C7W0	189 aa		18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	STRN3	Q13033	797 aa		18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	COASY	Q13057	564 aa		18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	POSTN	Q15063	836 aa		18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	TMEM240	Q5SV17	173 aa		18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	CHRDL2	Q6WN34	429 aa		18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	UNC13D	Q70J99	1090 aa		18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	IFNLR1	Q8IU57	520 aa	Predicted RBP	18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	SLC17A8	Q8NDX2	589 aa		18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	GDF15	Q99988	308 aa		18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	FTHL17	Q9BXU8	183 aa		18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	EXOC1	Q9NV70	894 aa		18.79	■□□□□ 0.6
C11orf49-222	ENST00000534581	PHLPP2	Q6ZVD8	1323 aa		18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	ADGRA3	Q8IWK6	1321 aa		18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	ABHD14A-ACY1	A0A1B0GW23	586 aa		18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	NMT1	P30419	496 aa	Known RBP	18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	MCM4	P33991	863 aa		18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	KCNJ6	P48051	423 aa		18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	PRPF4B	Q13523	1007 aa	Known RBP	18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	PCBP1	Q15365	356 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	TCTN1	Q2MV58	587 aa		18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	CNNM4	Q6P4Q7	775 aa		18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	HAUS6	Q7Z4H7	955 aa		18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	TMEM161B	Q8NDZ6	487 aa		18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	VWCE	Q96DN2	955 aa		18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	NTPCR	Q9BSD7	190 aa	Known RBP	18.78	■□□□□ 0.6
C11orf49-222	ENST00000534581	TCHH	Q07283	1943 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	WDR81	Q562E7	1941 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	PVALEF	A0A1B0GWK0	134 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	FRMD3	A2A2Y4	597 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	TSPAN1	O60635	241 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	EFCAB14	O75071	495 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	BAIAP3	O94812	1187 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	SMC2	O95347	1197 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	GCNT3	O95395	438 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	RPN1	P04843	607 aa	Known RBP	18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	NCKAP1L	P55160	1127 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	PNOC	Q13519	176 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	BICD1	Q96G01	975 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	CPB2	Q96IY4	423 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	RNPC3	Q96LT9	517 aa	Known RBP	18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	ADAM2	Q99965	735 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	TMX1	Q9H3N1	280 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	TMEM134	Q9H6X4	195 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	ARHGAP28	Q9P2N2	729 aa		18.77	■□□□□ 0.6
C11orf49-222	ENST00000534581	ACKR2	O00590	384 aa		18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	B4GALT5	O43286	388 aa		18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	AMH	P03971	560 aa		18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	MAPT	P10636	758 aa	Known RBP	18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	ABCD1	P33897	745 aa		18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	DPYD	Q12882	1025 aa		18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	SHH	Q15465	462 aa		18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	KMT5B	Q4FZB7	885 aa		18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	FAM26F	Q5R3K3	315 aa		18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	C9orf50	Q5SZB4	431 aa		18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	TWF2	Q6IBS0	349 aa	Known RBP	18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	STXBP4	Q6ZWJ1	553 aa		18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	HERVK_113	Q902F9	699 aa		18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	HPS3	Q969F9	1004 aa		18.76	■□□□□ 0.59
C11orf49-222	ENST00000534581	PRIMPOL	Q96LW4	560 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms