RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 STK33Q9BYT3 514 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 PORCNQ9H237 461 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 XPNPEP1Q9NQW7 623 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 ZNF263O14978 683 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 STRNO43815 780 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 TLR2O60603 784 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 ZBTB48P10074 688 aaPredicted RBP14.59□□□□□ -0.07
BEST1-208ENST00000534553 GJA5P36382 358 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 STAT1P42224 750 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 FBXL18Q96ME1 805 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 JPH2Q9BR39 696 aaPredicted RBP14.59□□□□□ -0.07
BEST1-208ENST00000534553 CBWD1Q9BRT8 395 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 POLR3FQ9H1D9 316 aaPredicted RBP14.59□□□□□ -0.07
BEST1-208ENST00000534553 SIX2Q9NPC8 291 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 APEX2Q9UBZ4 518 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 DDX41Q9UJV9 622 aaKnown RBP14.59□□□□□ -0.07
BEST1-208ENST00000534553 USP20Q9Y2K6 914 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 FHOD1Q9Y613 1164 aa14.59□□□□□ -0.07
BEST1-208ENST00000534553 WDR81Q562E7 1941 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 A0A0U1RQJ8 604 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 GSTTP1A0A1W2PQM5 241 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 NOP56O00567 594 aaKnown RBP14.58□□□□□ -0.08
BEST1-208ENST00000534553 TADA3O75528 432 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 GTF2H1P32780 548 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 TCF7P36402 384 aaPredicted RBP14.58□□□□□ -0.08
BEST1-208ENST00000534553 CYP27A1Q02318 531 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 STRN3Q13033 797 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 TTLL4Q14679 1199 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 Q3C1V9 767 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 PLPPR4Q7Z2D5 763 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 TRMT1LQ7Z2T5 733 aaKnown RBP14.58□□□□□ -0.08
BEST1-208ENST00000534553 TMC2Q8TDI7 906 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 ATRIPQ8WXE1 791 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 BBXQ8WY36 941 aaPredicted RBP14.58□□□□□ -0.08
BEST1-208ENST00000534553 CARD6Q9BX69 1037 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 MORF4L1Q9UBU8 362 aa14.58□□□□□ -0.08
BEST1-208ENST00000534553 EMSYQ7Z589 1322 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 HNRNPDLO14979 420 aaKnown RBP14.57□□□□□ -0.08
BEST1-208ENST00000534553 LGR5O75473 907 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 PIGRP01833 764 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 ACTN1P12814 892 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 ATP4AP20648 1035 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 FSTL1Q12841 308 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 TARBP2Q15633 366 aaKnown RBP14.57□□□□□ -0.08
BEST1-208ENST00000534553 SNRNP35Q16560 246 aaKnown RBP14.57□□□□□ -0.08
BEST1-208ENST00000534553 CELF3Q5SZQ8 465 aaKnown RBP14.57□□□□□ -0.08
BEST1-208ENST00000534553 IRF2BP2Q7Z5L9 587 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 ZNF467Q7Z7K2 595 aaPredicted RBP14.57□□□□□ -0.08
BEST1-208ENST00000534553 C2orf69Q8N8R5 385 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 SCFD2Q8WU76 684 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 BSNDQ8WZ55 320 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 FGD4Q96M96 766 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 LACRTQ9GZZ8 138 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 INTS2Q9H0H0 1204 aaKnown RBP14.57□□□□□ -0.08
BEST1-208ENST00000534553 IKZF4Q9H2S9 585 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 GBA2Q9HCG7 927 aaPredicted RBP14.57□□□□□ -0.08
BEST1-208ENST00000534553 JRKLQ9Y4A0 524 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 BTNL10A8MVZ5 291 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 PDHXO00330 501 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 PEX10O60683 326 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 PGK2P07205 417 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 ARL2P36404 184 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 MXI1P50539 228 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 GFPT1Q06210 699 aaPredicted RBP14.57□□□□□ -0.08
BEST1-208ENST00000534553 BMS1Q14692 1282 aaKnown RBP14.57□□□□□ -0.08
BEST1-208ENST00000534553 CBWD6Q4V339 395 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 CBWD3Q5JTY5 395 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 CBWD5Q5RIA9 395 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 WDR78Q5VTH9 848 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 PAPD7Q5XG87 772 aaKnown RBP14.57□□□□□ -0.08
BEST1-208ENST00000534553 SLFN12LQ6IEE8 588 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 SRGAP1Q7Z6B7 1085 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 PDCL2Q8N4E4 241 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 TCP11Q8WWU5 503 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 POMGNT1Q8WZA1 660 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 GOLGA1Q92805 767 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 MS4A4AQ96JQ5 239 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 RPGRIP1Q96KN7 1286 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 FAM81BQ96LP2 452 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 PCIF1Q9H4Z3 704 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 TSKSQ9UJT2 592 aa14.57□□□□□ -0.08
BEST1-208ENST00000534553 CCL15-CCL14A0A0B4J2E2 113 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 F8VZ95 297 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 SOCS7O14512 581 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 MAFO75444 373 aaPredicted RBP14.56□□□□□ -0.08
BEST1-208ENST00000534553 ABL1P00519 1130 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 TRIM49P0CI25 452 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 TRIM49CP0CI26 452 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 SOX5P35711 763 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 CCL15Q16663 113 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 MAP1SQ66K74 1059 aaPredicted RBP14.56□□□□□ -0.08
BEST1-208ENST00000534553 IQCEQ6IPM2 695 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 CCDC62Q6P9F0 684 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 DHX37Q8IY37 1157 aaKnown RBP14.56□□□□□ -0.08
BEST1-208ENST00000534553 ZNF710Q8N1W2 664 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 GPD1LQ8N335 351 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 RDH13Q8NBN7 331 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 DEPTORQ8TB45 409 aa14.56□□□□□ -0.08
BEST1-208ENST00000534553 ZNF526Q8TF50 670 aaPredicted RBP14.56□□□□□ -0.08
BEST1-208ENST00000534553 BICD1Q96G01 975 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms