RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 RFPL2O75678 378 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 FAM86B2P0C5J1 330 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 PHKA2P46019 1235 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 AFF1P51825 1210 aaKnown RBP13.94□□□□□ -0.18
SVIP-205ENST00000533774 PLCB2Q00722 1185 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 SART3Q15020 963 aaKnown RBP13.94□□□□□ -0.18
SVIP-205ENST00000533774 WWC2Q6AWC2 1192 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 MIS18BP1Q6P0N0 1132 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 HEATR3Q7Z4Q2 680 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 SMC5Q8IY18 1101 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 CKAP2LQ8IYA6 745 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 CMASQ8NFW8 434 aaPredicted RBP13.94□□□□□ -0.18
SVIP-205ENST00000533774 ZNF707Q96C28 371 aaPredicted RBP13.94□□□□□ -0.18
SVIP-205ENST00000533774 RPP25Q9BUL9 199 aaKnown RBP13.94□□□□□ -0.18
SVIP-205ENST00000533774 GBP3Q9H0R5 595 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 INPP5FQ9Y2H2 1132 aa13.94□□□□□ -0.18
SVIP-205ENST00000533774 MTF2Q9Y483 593 aaPredicted RBP13.94□□□□□ -0.18
SVIP-205ENST00000533774 IGLV3-22A0A075B6J6 115 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 ADAMTS3O15072 1205 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 ZNF862O60290 1169 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 OFD1O75665 1012 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 DDHD2O94830 711 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 DRP2Q13474 957 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 HTR4Q13639 388 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 NOMO2Q5JPE7 1267 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 DCLRE1AQ6PJP8 1040 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 TAS1R1Q7RTX1 841 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 CHD1LQ86WJ1 897 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 PLA2G4DQ86XP0 818 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 RIC8AQ9NPQ8 531 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 NCDNQ9UBB6 729 aa13.93□□□□□ -0.18
SVIP-205ENST00000533774 ANHXE9PGG2 379 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 INPPL1O15357 1258 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 MAGEB2O15479 319 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 ADRB1P08588 477 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 SPATA31D3P0C874 917 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 SREBF1P36956 1147 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 GNAQP50148 359 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 STARD6P59095 220 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 KIAA0319Q5VV43 1072 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 SPATA31D4Q6ZUB0 917 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 TMTC3Q6ZXV5 915 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 NIPA1Q7RTP0 329 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 MAP7D2Q96T17 732 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 EMILIN2Q9BXX0 1053 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 PARD6AQ9NPB6 346 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 SLC2A4RGQ9NR83 387 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 GABBR1Q9UBS5 961 aa13.92□□□□□ -0.18
SVIP-205ENST00000533774 ATRXP46100 2492 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 IPO5O00410 1097 aaKnown RBP13.91□□□□□ -0.18
SVIP-205ENST00000533774 SH2B2O14492 632 aaPredicted RBP13.91□□□□□ -0.18
SVIP-205ENST00000533774 C2CD2LO14523 706 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 TEX28O15482 410 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 PAPLNO95428 1278 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 LAMP2P13473 410 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 CLK2P49760 499 aaKnown RBP13.91□□□□□ -0.18
SVIP-205ENST00000533774 NUCB1Q02818 461 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 NONOQ15233 471 aaKnown RBP eCLIP13.91□□□□□ -0.18
SVIP-205ENST00000533774 ZNF528Q3MIS6 628 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 CRYGNQ8WXF5 182 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 SMG7Q92540 1137 aaKnown RBP13.91□□□□□ -0.18
SVIP-205ENST00000533774 NXPE3Q969Y0 559 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 TRAIPQ9BWF2 469 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 RHOBTB2Q9BYZ6 727 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 DACT1Q9NYF0 836 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 NUMBLQ9Y6R0 609 aa13.91□□□□□ -0.18
SVIP-205ENST00000533774 CNTNAP5Q8WYK1 1306 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 PRC1O43663 620 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 IGHDP01880 384 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 ZNF76P36508 570 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 GPC5P78333 572 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 CSTF1Q05048 431 aaKnown RBP13.9□□□□□ -0.18
SVIP-205ENST00000533774 RNASELQ05823 741 aaKnown RBP13.9□□□□□ -0.18
SVIP-205ENST00000533774 UGCGQ16739 394 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 ZNF746Q6NUN9 644 aaPredicted RBP13.9□□□□□ -0.18
SVIP-205ENST00000533774 GLB1LQ6UWU2 654 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 AGMOQ6ZNB7 445 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 ZBTB44Q8NCP5 570 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 NLRP7Q8WX94 980 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 NELL1Q92832 810 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 DDX23Q9BUQ8 820 aaKnown RBP13.9□□□□□ -0.18
SVIP-205ENST00000533774 MRPL17Q9NRX2 175 aaKnown RBP13.9□□□□□ -0.18
SVIP-205ENST00000533774 FAM105AQ9NUU6 356 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 MARCH5Q9NX47 278 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 CDV3Q9UKY7 258 aaKnown RBP13.9□□□□□ -0.18
SVIP-205ENST00000533774 SMG5Q9UPR3 1016 aaKnown RBP13.9□□□□□ -0.18
SVIP-205ENST00000533774 PCDHB13Q9Y5F0 798 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 FAM208BQ5VWN6 2430 aa13.9□□□□□ -0.18
SVIP-205ENST00000533774 FRYQ5TBA9 3013 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 F8W810 466 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 NRP1O14786 923 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 SPTLC1O15269 473 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 LILRB5O75023 590 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 EFEMP2O95967 443 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 FOSP01100 380 aaPredicted RBP13.89□□□□□ -0.19
SVIP-205ENST00000533774 GSPT1P15170 499 aaKnown RBP13.89□□□□□ -0.19
SVIP-205ENST00000533774 TMOD1P28289 359 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 AK2P54819 239 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 NAPAP54920 295 aa13.89□□□□□ -0.19
SVIP-205ENST00000533774 PDAP1Q13442 181 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms