RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 M0QZ92 97 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 KIAA0355O15063 1070 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 CSDE1O75534 798 aaKnown RBP13.13□□□□□ -0.31
COMMD9-208ENST00000533643 PPP1R37O75864 691 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 MYBP10242 640 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 DARSP14868 501 aaKnown RBP13.13□□□□□ -0.31
COMMD9-208ENST00000533643 SELPP16109 830 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 EIF4BP23588 611 aaKnown RBP13.13□□□□□ -0.31
COMMD9-208ENST00000533643 CYP2C18P33260 490 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 CASP5P51878 434 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 EFNA5P52803 228 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 ZC2HC1CQ53FD0 456 aaPredicted RBP13.13□□□□□ -0.31
COMMD9-208ENST00000533643 EPM2AIP1Q7L775 607 aaPredicted RBP13.13□□□□□ -0.31
COMMD9-208ENST00000533643 TAS1R3Q7RTX0 852 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 SRGAP1Q7Z6B7 1085 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 KIAA0895Q8NCT3 520 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 SLC17A8Q8NDX2 589 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 DEPTORQ8TB45 409 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 TMEM40Q8WWA1 233 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 KCNN1Q92952 543 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 TRIM43Q96BQ3 446 aaPredicted RBP13.13□□□□□ -0.31
COMMD9-208ENST00000533643 GCOM2Q9BZD3 368 aaPredicted RBP13.13□□□□□ -0.31
COMMD9-208ENST00000533643 OSBPL7Q9BZF2 842 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 CCDC113Q9H0I3 377 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 C2orf40Q9H1Z8 148 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 GDAQ9Y2T3 454 aa13.13□□□□□ -0.31
COMMD9-208ENST00000533643 MKI67P46013 3256 aaKnown RBP13.12□□□□□ -0.31
COMMD9-208ENST00000533643 H0YCG3 227 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 LETM1O95202 739 aaPredicted RBP13.12□□□□□ -0.31
COMMD9-208ENST00000533643 GCNT3O95395 438 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 IQCF3P0C7M6 154 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 SCP2P22307 547 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 GTF2BQ00403 316 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 MBTD1Q05BQ5 628 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 LPIN1Q14693 890 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 MBTPS1Q14703 1052 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 ZSCAN23Q3MJ62 389 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 FBXO47Q5MNV8 452 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 ZNF658Q5TYW1 1059 aaPredicted RBP13.12□□□□□ -0.31
COMMD9-208ENST00000533643 LRRC8DQ7L1W4 858 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 ZBTB8OSQ8IWT0 167 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 SMYD4Q8IYR2 804 aaPredicted RBP13.12□□□□□ -0.31
COMMD9-208ENST00000533643 TRIML1Q8N9V2 468 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 HTATIP2Q9BUP3 242 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 GTPBP4Q9BZE4 634 aaKnown RBP13.12□□□□□ -0.31
COMMD9-208ENST00000533643 PPP1R12CQ9BZL4 782 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 FZD8Q9H461 694 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 TMEM134Q9H6X4 195 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 NOC2LQ9Y3T9 749 aaKnown RBP13.12□□□□□ -0.31
COMMD9-208ENST00000533643 PCDHB13Q9Y5F0 798 aa13.12□□□□□ -0.31
COMMD9-208ENST00000533643 K7ERI5 159 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 PRPF6O94906 941 aaKnown RBP13.11□□□□□ -0.31
COMMD9-208ENST00000533643 TIMP1P01033 207 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 EDN1P05305 212 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 FGFR4P22455 802 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 ITGB8P26012 769 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 HOXD13P35453 343 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 NLRP12P59046 1061 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 KCNA1Q09470 495 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 ALCAMQ13740 583 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 GPNMBQ14956 572 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 AMHR2Q16671 573 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 L1TD1Q5T7N2 865 aaKnown RBP13.11□□□□□ -0.31
COMMD9-208ENST00000533643 C7orf61Q8IZ16 206 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 ZNF507Q8TCN5 953 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 SCFD1Q8WVM8 642 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 INO80BQ9C086 356 aaPredicted RBP13.11□□□□□ -0.31
COMMD9-208ENST00000533643 WNT8AQ9H1J5 351 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 AGO3Q9H9G7 860 aaKnown RBP13.11□□□□□ -0.31
COMMD9-208ENST00000533643 PRDM5Q9NQX1 630 aaPredicted RBP13.11□□□□□ -0.31
COMMD9-208ENST00000533643 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
COMMD9-208ENST00000533643 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 PPP1R3GB7ZBB8 358 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 INO80B-WBP1J3KQ70 363 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 ACKR2O00590 384 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 EIF3DO15371 548 aaKnown RBP eCLIP13.1□□□□□ -0.31
COMMD9-208ENST00000533643 RPS6KA5O75582 802 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 PRKCBP05771 671 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 GHRP10912 638 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
COMMD9-208ENST00000533643 ABCD1P33897 745 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 PRCPP42785 496 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 CCL23P55773 120 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 MAPK6Q16659 721 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 FAM187BQ17R55 369 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 BMT2Q1RMZ1 405 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 COBLL1Q53SF7 1204 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 STXBP4Q6ZWJ1 553 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 FAM228AQ86W67 206 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 MAP4K3Q8IVH8 894 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 MYOCDQ8IZQ8 938 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 ADSSL1Q8N142 457 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 HVCN1Q96D96 273 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 SCLYQ96I15 445 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 ACCSQ96QU6 501 aa13.1□□□□□ -0.31
COMMD9-208ENST00000533643 GZF1Q9H116 711 aaPredicted RBP13.1□□□□□ -0.31
COMMD9-208ENST00000533643 IKZF4Q9H2S9 585 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms