RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 CXCL10P02778 98 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 EIF4BP23588 611 aaKnown RBP8.71□□□□□ -1.02
COMMD9-207ENST00000533308 PHKA2P46019 1235 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 MLLT1Q03111 559 aaPredicted RBP8.71□□□□□ -1.02
COMMD9-207ENST00000533308 FPGSQ05932 587 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 EHHADHQ08426 723 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 KCNA1Q09470 495 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 TFDP1Q14186 410 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 MXD4Q14582 209 aaPredicted RBP8.71□□□□□ -1.02
COMMD9-207ENST00000533308 KMT5BQ4FZB7 885 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 ZC2HC1CQ53FD0 456 aaPredicted RBP8.71□□□□□ -1.02
COMMD9-207ENST00000533308 PLEKHG4Q58EX7 1191 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 C9orf50Q5SZB4 431 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 CNNM4Q6P4Q7 775 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 UNC13DQ70J99 1090 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 TMCO2Q7Z6W1 182 aaPredicted RBP8.71□□□□□ -1.02
COMMD9-207ENST00000533308 ZNF410Q86VK4 478 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 IFNLR1Q8IU57 520 aaPredicted RBP8.71□□□□□ -1.02
COMMD9-207ENST00000533308 EXOC8Q8IYI6 725 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 KIAA0895Q8NCT3 520 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 TMEM161BQ8NDZ6 487 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 DEPTORQ8TB45 409 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 IFT74Q96LB3 600 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 PYM1Q9BRP8 204 aaKnown RBP8.71□□□□□ -1.02
COMMD9-207ENST00000533308 TIPINQ9BVW5 301 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 IFIH1Q9BYX4 1025 aaKnown RBP8.71□□□□□ -1.02
COMMD9-207ENST00000533308 GCOM2Q9BZD3 368 aaPredicted RBP8.71□□□□□ -1.02
COMMD9-207ENST00000533308 INO80BQ9C086 356 aaPredicted RBP8.71□□□□□ -1.02
COMMD9-207ENST00000533308 CLSTN2Q9H4D0 955 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 KMT5AQ9NQR1 393 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 ARHGAP28Q9P2N2 729 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 USP25Q9UHP3 1055 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 PADI3Q9ULW8 664 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 PHLPP2Q6ZVD8 1323 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 ZMYM2Q9UBW7 1377 aa8.71□□□□□ -1.02
COMMD9-207ENST00000533308 DENND3A2RUS2 1198 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 TRAK2O60296 914 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 TSPAN1O60635 241 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 RPS6KA5O75582 802 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 PPP1R37O75864 691 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 PRPF6O94906 941 aaKnown RBP8.7□□□□□ -1.02
COMMD9-207ENST00000533308 GCNT3O95395 438 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 RPN1P04843 607 aaKnown RBP8.7□□□□□ -1.02
COMMD9-207ENST00000533308 PRKCBP05771 671 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 MAPTP10636 758 aaKnown RBP8.7□□□□□ -1.02
COMMD9-207ENST00000533308 IBSPP21815 317 aaPredicted RBP8.7□□□□□ -1.02
COMMD9-207ENST00000533308 NFX1Q12986 1120 aaKnown RBP8.7□□□□□ -1.02
COMMD9-207ENST00000533308 PAK2Q13177 524 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 HERC4Q5GLZ8 1057 aaPredicted RBP8.7□□□□□ -1.02
COMMD9-207ENST00000533308 NT5DC1Q5TFE4 455 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 EEF1DP3Q658K8 133 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 ISM2Q6H9L7 571 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 OTOP2Q7RTS6 562 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 FAM178BQ8IXR5 827 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 CCDC65Q8IXS2 484 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 SMYD4Q8IYR2 804 aaPredicted RBP8.7□□□□□ -1.02
COMMD9-207ENST00000533308 TMEM199Q8N511 208 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 SPIRE2Q8WWL2 714 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 TIGD1Q96MW7 591 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.7□□□□□ -1.02
COMMD9-207ENST00000533308 SLC39A2Q9NP94 309 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 IL23AQ9NPF7 189 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 AGPAT5Q9NUQ2 364 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 CXXC1Q9P0U4 656 aaPredicted RBP8.7□□□□□ -1.02
COMMD9-207ENST00000533308 ST3GAL5Q9UNP4 418 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 GDAQ9Y2T3 454 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 PCDHA5Q9Y5H7 936 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 NR2E3Q9Y5X4 410 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 KIAA1671Q9BY89 1806 aa8.7□□□□□ -1.02
COMMD9-207ENST00000533308 ANK1P16157 1881 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 RALGAPA2Q2PPJ7 1873 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 BIN1O00499 593 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 ASAP2O43150 1006 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 RPLP2P05387 115 aaKnown RBP8.69□□□□□ -1.02
COMMD9-207ENST00000533308 GAP43P17677 238 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 ARF4P18085 180 aaPredicted RBP8.69□□□□□ -1.02
COMMD9-207ENST00000533308 SFPQP23246 707 aaKnown RBP eCLIP8.69□□□□□ -1.02
COMMD9-207ENST00000533308 HOXA11P31270 313 aaPredicted RBP8.69□□□□□ -1.02
COMMD9-207ENST00000533308 RFC2P35250 354 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 HOXD13P35453 343 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 DEFB103AP81534 67 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 AMPD3Q01432 767 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 STK4Q13043 487 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 PPIGQ13427 754 aaKnown RBP eCLIP8.69□□□□□ -1.02
COMMD9-207ENST00000533308 DSC3Q14574 896 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 PPP2R5AQ15172 486 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 NFKBIBQ15653 356 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 FAM26FQ5R3K3 315 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 TMEM240Q5SV17 173 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 SLC39A4Q6P5W5 647 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.69□□□□□ -1.02
COMMD9-207ENST00000533308 ZNF365Q70YC5 407 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 CATSPER4Q7RTX7 472 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 HAUS6Q7Z4H7 955 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 SRGAP1Q7Z6B7 1085 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 RTN4RL1Q86UN2 441 aaPredicted RBP8.69□□□□□ -1.02
COMMD9-207ENST00000533308 ZBTB8OSQ8IWT0 167 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 GDF15Q99988 308 aa8.69□□□□□ -1.02
COMMD9-207ENST00000533308 LBHD1Q9BQE6 289 aaPredicted RBP8.69□□□□□ -1.02
COMMD9-207ENST00000533308 TARS2Q9BW92 718 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms