RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 FAM50BQ9Y247 325 aa25.69■■□□□ 1.7
LTBP3-220ENST00000532661 MCM7P33993 719 aa25.68■■□□□ 1.7
LTBP3-220ENST00000532661 ZP2Q05996 745 aa25.68■■□□□ 1.7
LTBP3-220ENST00000532661 SAFBQ15424 915 aaKnown RBP eCLIP25.68■■□□□ 1.7
LTBP3-220ENST00000532661 PLPP4Q5VZY2 271 aa25.68■■□□□ 1.7
LTBP3-220ENST00000532661 FERMT3Q86UX7 667 aa25.68■■□□□ 1.7
LTBP3-220ENST00000532661 MTRQ99707 1265 aa25.68■■□□□ 1.7
LTBP3-220ENST00000532661 LLPHQ9BRT6 129 aaKnown RBP25.68■■□□□ 1.7
LTBP3-220ENST00000532661 C1QTNF1Q9BXJ1 281 aa25.68■■□□□ 1.7
LTBP3-220ENST00000532661 AGPAT5Q9NUQ2 364 aa25.68■■□□□ 1.7
LTBP3-220ENST00000532661 BARX2Q9UMQ3 279 aaPredicted RBP25.68■■□□□ 1.7
LTBP3-220ENST00000532661 LZTS1Q9Y250 596 aa25.68■■□□□ 1.7
LTBP3-220ENST00000532661 C5orf42Q9H799 3197 aa25.67■■□□□ 1.7
LTBP3-220ENST00000532661 POTEMA6NI47 508 aa25.67■■□□□ 1.7
LTBP3-220ENST00000532661 NT5C1B-RDH14C9J2C7 533 aa25.67■■□□□ 1.7
LTBP3-220ENST00000532661 LYPLA2O95372 231 aa25.67■■□□□ 1.7
LTBP3-220ENST00000532661 SMAD2Q15796 467 aaKnown RBP25.67■■□□□ 1.7
LTBP3-220ENST00000532661 SRGAP1Q7Z6B7 1085 aa25.67■■□□□ 1.7
LTBP3-220ENST00000532661 RNF149Q8NC42 400 aa25.67■■□□□ 1.7
LTBP3-220ENST00000532661 TCP11Q8WWU5 503 aa25.67■■□□□ 1.7
LTBP3-220ENST00000532661 ZSCAN31Q96LW9 406 aaPredicted RBP25.67■■□□□ 1.7
LTBP3-220ENST00000532661 SPG21Q9NZD8 308 aa25.67■■□□□ 1.7
LTBP3-220ENST00000532661 GAS2O43903 313 aaKnown RBP25.66■■□□□ 1.7
LTBP3-220ENST00000532661 SMAD4Q13485 552 aaKnown RBP25.66■■□□□ 1.7
LTBP3-220ENST00000532661 DUSP6Q16828 381 aa25.66■■□□□ 1.7
LTBP3-220ENST00000532661 SLC39A11Q8N1S5 342 aa25.66■■□□□ 1.7
LTBP3-220ENST00000532661 VN1R2Q8NFZ6 395 aa25.66■■□□□ 1.7
LTBP3-220ENST00000532661 PIGOQ8TEQ8 1089 aa25.66■■□□□ 1.7
LTBP3-220ENST00000532661 TCF25Q9BQ70 676 aa25.66■■□□□ 1.7
LTBP3-220ENST00000532661 ANKEF1Q9NU02 776 aa25.66■■□□□ 1.7
LTBP3-220ENST00000532661 PUF60Q9UHX1 559 aaKnown RBP25.66■■□□□ 1.7
LTBP3-220ENST00000532661 HIDE1A8MVS5 230 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 PI4K2BG5E9Z4 385 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 ASAP2O43150 1006 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 ZNF623O75123 536 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 SKIP12755 728 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 HOXA11P31270 313 aaPredicted RBP25.65■■□□□ 1.7
LTBP3-220ENST00000532661 PPM1AP35813 382 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 BCAR1P56945 870 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 ZNF174Q15697 407 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 PDE12Q6L8Q7 609 aaKnown RBP25.65■■□□□ 1.7
LTBP3-220ENST00000532661 ADHFE1Q8IWW8 467 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 ASAP3Q8TDY4 903 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 MRPL9Q9BYD2 267 aaKnown RBP25.65■■□□□ 1.7
LTBP3-220ENST00000532661 ENTPD7Q9NQZ7 604 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 PRKAG3Q9UGI9 489 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 INPP5FQ9Y2H2 1132 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 PCDHB2Q9Y5E7 798 aa25.65■■□□□ 1.7
LTBP3-220ENST00000532661 C19orf67A6NJJ6 358 aa25.64■■□□□ 1.7
LTBP3-220ENST00000532661 OFD1O75665 1012 aa25.64■■□□□ 1.7
LTBP3-220ENST00000532661 KRT17Q04695 432 aa25.64■■□□□ 1.7
LTBP3-220ENST00000532661 UBXN11Q5T124 520 aa25.64■■□□□ 1.7
LTBP3-220ENST00000532661 FBXO18Q8NFZ0 1043 aa25.64■■□□□ 1.7
LTBP3-220ENST00000532661 C11orf16Q9NQ32 467 aa25.64■■□□□ 1.7
LTBP3-220ENST00000532661 FAM86C2PA6NEL3 165 aa25.63■■□□□ 1.69
LTBP3-220ENST00000532661 EYA4O95677 639 aa25.63■■□□□ 1.69
LTBP3-220ENST00000532661 SPATA31C1P0DKV0 1188 aa25.63■■□□□ 1.69
LTBP3-220ENST00000532661 RARRES1P49788 294 aa25.63■■□□□ 1.69
LTBP3-220ENST00000532661 RAB27AP51159 221 aa25.63■■□□□ 1.69
LTBP3-220ENST00000532661 NOMO2Q5JPE7 1267 aa25.63■■□□□ 1.69
LTBP3-220ENST00000532661 GLB1LQ6UWU2 654 aa25.63■■□□□ 1.69
LTBP3-220ENST00000532661 AGMOQ6ZNB7 445 aa25.63■■□□□ 1.69
LTBP3-220ENST00000532661 TMC7Q7Z402 723 aa25.63■■□□□ 1.69
LTBP3-220ENST00000532661 LRFN3Q9BTN0 628 aa25.63■■□□□ 1.69
LTBP3-220ENST00000532661 FOXP1Q9H334 677 aaPredicted RBP25.63■■□□□ 1.69
LTBP3-220ENST00000532661 NRDE2Q9H7Z3 1164 aa25.63■■□□□ 1.69
LTBP3-220ENST00000532661 SH2B1Q9NRF2 756 aaPredicted RBP25.63■■□□□ 1.69
LTBP3-220ENST00000532661 TBC1D13Q9NVG8 400 aa25.63■■□□□ 1.69
LTBP3-220ENST00000532661 ZC3H11AO75152 810 aaKnown RBP eCLIP25.62■■□□□ 1.69
LTBP3-220ENST00000532661 MED24O75448 989 aa25.62■■□□□ 1.69
LTBP3-220ENST00000532661 ARL2P36404 184 aa25.62■■□□□ 1.69
LTBP3-220ENST00000532661 TECP42680 631 aa25.62■■□□□ 1.69
LTBP3-220ENST00000532661 ALDH7A1P49419 539 aaKnown RBP25.62■■□□□ 1.69
LTBP3-220ENST00000532661 AFF1P51825 1210 aaKnown RBP25.62■■□□□ 1.69
LTBP3-220ENST00000532661 PTENP60484 403 aa25.62■■□□□ 1.69
LTBP3-220ENST00000532661 HMGN5P82970 282 aaKnown RBP25.62■■□□□ 1.69
LTBP3-220ENST00000532661 COASYQ13057 564 aa25.62■■□□□ 1.69
LTBP3-220ENST00000532661 MRPL10Q7Z7H8 261 aaKnown RBP25.62■■□□□ 1.69
LTBP3-220ENST00000532661 TMEM173Q86WV6 379 aaPredicted RBP25.62■■□□□ 1.69
LTBP3-220ENST00000532661 FAM184AQ8NB25 1140 aa25.62■■□□□ 1.69
LTBP3-220ENST00000532661 SMRP1Q8NCR6 262 aa25.62■■□□□ 1.69
LTBP3-220ENST00000532661 PGBD4Q96DM1 585 aa25.62■■□□□ 1.69
LTBP3-220ENST00000532661 CDCA3Q99618 268 aaPredicted RBP25.62■■□□□ 1.69
LTBP3-220ENST00000532661 B4GALT3O60512 393 aa25.61■■□□□ 1.69
LTBP3-220ENST00000532661 DGAT1O75907 488 aa25.61■■□□□ 1.69
LTBP3-220ENST00000532661 RBM25P49756 843 aaKnown RBP25.61■■□□□ 1.69
LTBP3-220ENST00000532661 CAPSQ13938 189 aa25.61■■□□□ 1.69
LTBP3-220ENST00000532661 MXD4Q14582 209 aaPredicted RBP25.61■■□□□ 1.69
LTBP3-220ENST00000532661 TMEM31Q5JXX7 168 aa25.61■■□□□ 1.69
LTBP3-220ENST00000532661 CATSPER3Q86XQ3 398 aa25.61■■□□□ 1.69
LTBP3-220ENST00000532661 CCDC43Q96MW1 224 aaKnown RBP25.61■■□□□ 1.69
LTBP3-220ENST00000532661 GBP3Q9H0R5 595 aa25.61■■□□□ 1.69
LTBP3-220ENST00000532661 NGRNQ9NPE2 291 aaKnown RBP25.61■■□□□ 1.69
LTBP3-220ENST00000532661 DNAJB4Q9UDY4 337 aa25.61■■□□□ 1.69
LTBP3-220ENST00000532661 ARID2Q68CP9 1835 aa25.6■■□□□ 1.69
LTBP3-220ENST00000532661 TSPAN1O60635 241 aa25.6■■□□□ 1.69
LTBP3-220ENST00000532661 USO1O60763 962 aaKnown RBP25.6■■□□□ 1.69
LTBP3-220ENST00000532661 OR52Z1P0C646 297 aa25.6■■□□□ 1.69
LTBP3-220ENST00000532661 GLRA2P23416 452 aa25.6■■□□□ 1.69
LTBP3-220ENST00000532661 KCNC3Q14003 757 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms