RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 DPY19L2P1Q6NXN4 242 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 ADAT2Q7Z6V5 191 aaKnown RBP16.07■□□□□ 0.16
NXF1-213ENST00000532297 BHMT2Q9H2M3 363 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 PABPC3Q9H361 631 aaKnown RBP16.07■□□□□ 0.16
NXF1-213ENST00000532297 SLC5A4Q9NY91 659 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 SUCLA2Q9P2R7 463 aaPredicted RBP16.07■□□□□ 0.16
NXF1-213ENST00000532297 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.07■□□□□ 0.16
NXF1-213ENST00000532297 NR2E1Q9Y466 385 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 A8MUI8 341 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 INHBEP58166 350 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 ICA1Q05084 483 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 CTTNQ14247 550 aaKnown RBP16.06■□□□□ 0.16
NXF1-213ENST00000532297 SH3BP5LQ7L8J4 393 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 SIAH1Q8IUQ4 282 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 RNF217Q8TC41 542 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 STK38LQ9Y2H1 464 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 LTBP1Q14766 1721 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 POLRMTO00411 1230 aaKnown RBP16.06■□□□□ 0.16
NXF1-213ENST00000532297 TOM1O60784 492 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 UCHL3P15374 230 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 PDE6BP35913 854 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 POU5F1Q01860 360 aaKnown RBP16.06■□□□□ 0.16
NXF1-213ENST00000532297 ERICH1Q86X53 443 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 KIF2BQ8N4N8 673 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 ETNPPLQ8TBG4 499 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 LENG9Q96B70 501 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 RNF25Q96BH1 459 aaPredicted RBP16.06■□□□□ 0.16
NXF1-213ENST00000532297 KLHL29Q96CT2 875 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 SH3GL3Q99963 347 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 CCDC113Q9H0I3 377 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 STXBP5LQ9Y2K9 1186 aa16.06■□□□□ 0.16
NXF1-213ENST00000532297 PON1P27169 355 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 NMT1P30419 496 aaKnown RBP16.05■□□□□ 0.16
NXF1-213ENST00000532297 PLTPP55058 493 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 DR1Q01658 176 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 PRPF4BQ13523 1007 aaKnown RBP16.05■□□□□ 0.16
NXF1-213ENST00000532297 SLC29A2Q14542 456 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 TBC1D10BQ4KMP7 808 aaPredicted RBP16.05■□□□□ 0.16
NXF1-213ENST00000532297 NT5DC3Q86UY8 548 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 UHMK1Q8TAS1 419 aaKnown RBP16.05■□□□□ 0.16
NXF1-213ENST00000532297 ASTN1O14525 1302 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 CETN3O15182 167 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 SNX3O60493 162 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 GCNT3O95395 438 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 KRT16P08779 473 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 MARSP56192 900 aaKnown RBP16.05■□□□□ 0.16
NXF1-213ENST00000532297 HYIQ5T013 277 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 SLFN11Q7Z7L1 901 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 ZC3H12CQ9C0D7 883 aaKnown RBP16.05■□□□□ 0.16
NXF1-213ENST00000532297 ZDHHC18Q9NUE0 388 aa16.05■□□□□ 0.16
NXF1-213ENST00000532297 LRRN2O75325 713 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 FLOT1O75955 427 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 GFPT2O94808 682 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 PDE6CP51160 858 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 PLS1Q14651 629 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 AP1ARQ63HQ0 302 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 SYCE1Q8N0S2 351 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 ERP44Q9BS26 406 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 YIPF3Q9GZM5 350 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 CCDC134Q9H6E4 229 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 CHORDC1Q9UHD1 332 aaPredicted RBP16.04■□□□□ 0.16
NXF1-213ENST00000532297 CORO1CQ9ULV4 474 aaPredicted RBP16.04■□□□□ 0.16
NXF1-213ENST00000532297 DAAM1Q9Y4D1 1078 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 BZW2Q9Y6E2 419 aaKnown RBP16.04■□□□□ 0.16
NXF1-213ENST00000532297 GOLGA6L10A0A0M3HER8 536 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 BBOX1O75936 387 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 SLCO1A2P46721 670 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 RRP1BQ14684 758 aaKnown RBP16.04■□□□□ 0.16
NXF1-213ENST00000532297 GPATCH4Q5T3I0 446 aaKnown RBP16.04■□□□□ 0.16
NXF1-213ENST00000532297 DUPD1Q68J44 220 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 TRMT1LQ7Z2T5 733 aaKnown RBP16.04■□□□□ 0.16
NXF1-213ENST00000532297 PARD3BQ8TEW8 1205 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 GLG1Q92896 1179 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 ZBTB10Q96DT7 871 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 HES6Q96HZ4 224 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 OSGEPQ9NPF4 335 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 HOMER3Q9NSC5 361 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 GCNT4Q9P109 453 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 ARMCX3Q9UH62 379 aaPredicted RBP16.04■□□□□ 0.16
NXF1-213ENST00000532297 GREB1LQ9C091 1923 aaPredicted RBP16.04■□□□□ 0.16
NXF1-213ENST00000532297 ANKRD31Q8N7Z5 1873 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 IGSF9BQ9UPX0 1349 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 G3V3G9 751 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 AGTP01019 485 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 H2AFZP0C0S5 128 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 CRKP46108 304 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 ZNF131P52739 623 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 COPS2P61201 443 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 DCAF8Q5TAQ9 597 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 H2AFVQ71UI9 128 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
NXF1-213ENST00000532297 CNKSR1Q969H4 720 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 FAM167BQ9BTA0 163 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 SIX2Q9NPC8 291 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 AMFRQ9UKV5 643 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 SNX24Q9Y343 169 aa16.04■□□□□ 0.16
NXF1-213ENST00000532297 USP15Q9Y4E8 981 aaPredicted RBP16.04■□□□□ 0.16
NXF1-213ENST00000532297 MSH4O15457 936 aa16.03■□□□□ 0.16
NXF1-213ENST00000532297 HLA-DOAP06340 250 aa16.03■□□□□ 0.16
NXF1-213ENST00000532297 ATP2A2P16615 1042 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms