RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 CYP2C9P11712 490 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 GAP43P17677 238 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 ABCD1P33897 745 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 DPYDQ12882 1025 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 MAPK7Q13164 816 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 PPP2R5AQ15172 486 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 TUSC1Q2TAM9 212 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 NT5DC1Q5TFE4 455 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 FAM43BQ6ZT52 329 aaPredicted RBP13.84□□□□□ -0.19
COPB1-208ENST00000532088 UNC13DQ70J99 1090 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 CCDC65Q8IXS2 484 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 CCDC155Q8N6L0 562 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 CAGE1Q8TC20 777 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 SH2D3AQ9BRG2 576 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 REEP2Q9BRK0 252 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 NUP62CLQ9H1M0 184 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 LARSQ9P2J5 1176 aaKnown RBP13.84□□□□□ -0.19
COPB1-208ENST00000532088 NOD1Q9Y239 953 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 PHLPP2Q6ZVD8 1323 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 BRCA2P51587 3418 aa13.83□□□□□ -0.19
COPB1-208ENST00000532088 DCDC2CA8MYV0 355 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 B4GALT4O60513 344 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 TBCAO75347 108 aaKnown RBP13.83□□□□□ -0.2
COPB1-208ENST00000532088 SMC2O95347 1197 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 PLS3P13797 630 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 NAMPTP43490 491 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 AFMP43652 599 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 EHHADHQ08426 723 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 CUL4BQ13620 913 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 DHX8Q14562 1220 aaKnown RBP13.83□□□□□ -0.2
COPB1-208ENST00000532088 KCNB1Q14721 858 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 BLOC1S3Q6QNY0 202 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 ZNF410Q86VK4 478 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 KIAA0319LQ8IZA0 1049 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 DAW1Q8N136 415 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 METTL13Q8N6R0 699 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.2
COPB1-208ENST00000532088 GSDMAQ96QA5 445 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 NTPCRQ9BSD7 190 aaKnown RBP13.83□□□□□ -0.2
COPB1-208ENST00000532088 NFKBIZQ9BYH8 718 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 POLR3FQ9H1D9 316 aaPredicted RBP13.83□□□□□ -0.2
COPB1-208ENST00000532088 SUGCTQ9HAC7 445 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 PARVGQ9HBI0 331 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 OLFML3Q9NRN5 406 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 RMND1Q9NWS8 449 aa13.83□□□□□ -0.2
COPB1-208ENST00000532088 SUCLA2Q9P2R7 463 aaPredicted RBP13.83□□□□□ -0.2
COPB1-208ENST00000532088 H0YCG3 227 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 FAM13AO94988 1023 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 SARSP49591 514 aaKnown RBP13.82□□□□□ -0.2
COPB1-208ENST00000532088 CLCN3P51790 818 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 ASIC1P78348 528 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 ZNF200P98182 395 aaPredicted RBP13.82□□□□□ -0.2
COPB1-208ENST00000532088 PSMD2Q13200 908 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 TFDP1Q14186 410 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 TRIM71Q2Q1W2 868 aaKnown RBP13.82□□□□□ -0.2
COPB1-208ENST00000532088 FAM26DQ5JW98 314 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 CCDC183Q5T5S1 534 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 FAM102BQ5T8I3 360 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 RUFY4Q6ZNE9 571 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 RBM43Q6ZSC3 357 aaKnown RBP13.82□□□□□ -0.2
COPB1-208ENST00000532088 DYMQ7RTS9 669 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 LRRC71Q8N4P6 559 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 STAMQ92783 540 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 IFT74Q96LB3 600 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 ST6GALNAC4Q9H4F1 302 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 TRMT13Q9NUP7 481 aaKnown RBP13.82□□□□□ -0.2
COPB1-208ENST00000532088 PANK4Q9NVE7 773 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 LIMD1Q9UGP4 676 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 SLC27A5Q9Y2P5 690 aa13.82□□□□□ -0.2
COPB1-208ENST00000532088 NPHP3-ACAD11A0A0J9YXS1 232 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 KLRC4O43908 158 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 TRAK2O60296 914 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 RHOBTB3O94955 611 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 PARNO95453 639 aaKnown RBP13.81□□□□□ -0.2
COPB1-208ENST00000532088 RPN1P04843 607 aaKnown RBP13.81□□□□□ -0.2
COPB1-208ENST00000532088 GLRA2P23416 452 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 SMTNP53814 917 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 LAMTOR4Q0VGL1 99 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 DMP1Q13316 513 aaPredicted RBP13.81□□□□□ -0.2
COPB1-208ENST00000532088 DRP2Q13474 957 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 BFSP2Q13515 415 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 ALCAMQ13740 583 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 PCBP1Q15365 356 aaKnown RBP eCLIP13.81□□□□□ -0.2
COPB1-208ENST00000532088 LRRC26Q2I0M4 334 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 TRIM60Q495X7 471 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 TJAP1Q5JTD0 557 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 GRAMD1CQ8IYS0 662 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 TRIML1Q8N9V2 468 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 DNAJB3Q8WWF6 145 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 PRPF31Q8WWY3 499 aaKnown RBP13.81□□□□□ -0.2
COPB1-208ENST00000532088 DHX38Q92620 1227 aaKnown RBP13.81□□□□□ -0.2
COPB1-208ENST00000532088 SMARCE1Q969G3 411 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 TMEM143Q96AN5 459 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 HTATIP2Q9BUP3 242 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 TRPV6Q9H1D0 765 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 BLZF1Q9H2G9 400 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 GPRC5CQ9NQ84 441 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 PCDHGC3Q9UN70 934 aa13.81□□□□□ -0.2
COPB1-208ENST00000532088 AKT3Q9Y243 479 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms