RNA–Protein interactions for RNA: ENST00000531768.1

RSF1-210, Transcript of remodeling and spacing factor 1, human

TSL 2

Gene RSF1, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RSF1-210	ENST00000531768	LONRF2	Q1L5Z9	754 aa		5.37	□□□□□ -1.55
RSF1-210	ENST00000531768	FAM214A	Q32MH5	1076 aa		5.37	□□□□□ -1.55
RSF1-210	ENST00000531768	TRIM61	Q5EBN2	209 aa		5.37	□□□□□ -1.55
RSF1-210	ENST00000531768	PAPD7	Q5XG87	772 aa	Known RBP	5.37	□□□□□ -1.55
RSF1-210	ENST00000531768	LRP10	Q7Z4F1	713 aa		5.37	□□□□□ -1.55
RSF1-210	ENST00000531768	IGSF22	Q8N9C0	903 aa		5.37	□□□□□ -1.55
RSF1-210	ENST00000531768	SCLY	Q96I15	445 aa		5.37	□□□□□ -1.55
RSF1-210	ENST00000531768	SLC46A2	Q9BY10	475 aa		5.37	□□□□□ -1.55
RSF1-210	ENST00000531768	SFMBT1	Q9UHJ3	866 aa		5.37	□□□□□ -1.55
RSF1-210	ENST00000531768	UBA6	A0AVT1	1052 aa	Predicted RBP	5.36	□□□□□ -1.55
RSF1-210	ENST00000531768	ERBB2	P04626	1255 aa		5.36	□□□□□ -1.55
RSF1-210	ENST00000531768	USP14	P54578	494 aa		5.36	□□□□□ -1.55
RSF1-210	ENST00000531768	FAM189B	P81408	668 aa		5.36	□□□□□ -1.55
RSF1-210	ENST00000531768	SUPT20H	Q8NEM7	779 aa		5.36	□□□□□ -1.55
RSF1-210	ENST00000531768	CCDC113	Q9H0I3	377 aa		5.36	□□□□□ -1.55
RSF1-210	ENST00000531768	EIF2B4	Q9UI10	523 aa	Known RBP	5.36	□□□□□ -1.55
RSF1-210	ENST00000531768	TCRBV16S1A1N1	A0A5B0	115 aa		5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	TMEM200C	A6NKL6	621 aa		5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	HOXA3	O43365	443 aa	Predicted RBP	5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	TYRP1	P17643	537 aa		5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	KIF11	P52732	1056 aa		5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	METTL24	Q5JXM2	366 aa		5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	TTC38	Q5R3I4	469 aa		5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	PRAMEF9	Q5VWM5	478 aa		5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	PDCD2L	Q9BRP1	358 aa		5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	CPEB1	Q9BZB8	566 aa	Known RBP	5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	WDR11	Q9BZH6	1224 aa		5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	SYBU	Q9NX95	663 aa		5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	ANKFY1	Q9P2R3	1169 aa		5.35	□□□□□ -1.55
RSF1-210	ENST00000531768	SPATA31A6	Q5VVP1	1343 aa		5.34	□□□□□ -1.55
RSF1-210	ENST00000531768	CCDC85C	A6NKD9	419 aa		5.34	□□□□□ -1.55
RSF1-210	ENST00000531768	DVL2	O14641	736 aa		5.34	□□□□□ -1.55
RSF1-210	ENST00000531768	KRT37	O76014	449 aa		5.34	□□□□□ -1.55
RSF1-210	ENST00000531768	BCAR1	P56945	870 aa		5.34	□□□□□ -1.55
RSF1-210	ENST00000531768	IQSEC1	Q6DN90	963 aa		5.34	□□□□□ -1.55
RSF1-210	ENST00000531768	FBXO42	Q6P3S6	717 aa		5.34	□□□□□ -1.55
RSF1-210	ENST00000531768	CCDC62	Q6P9F0	684 aa		5.34	□□□□□ -1.55
RSF1-210	ENST00000531768	ARHGEF19	Q8IW93	802 aa		5.34	□□□□□ -1.55
RSF1-210	ENST00000531768	CKAP2L	Q8IYA6	745 aa		5.34	□□□□□ -1.55
RSF1-210	ENST00000531768	OR52N2	Q8NGI0	321 aa		5.34	□□□□□ -1.55
RSF1-210	ENST00000531768	ENKD1	Q9H0I2	346 aa		5.34	□□□□□ -1.55
RSF1-210	ENST00000531768	KDM2B	Q8NHM5	1336 aa		5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	ITGB6	P18564	788 aa		5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	MECP2	P51608	486 aa	Known RBP	5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	MYBPC3	Q14896	1274 aa		5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	VPS72	Q15906	364 aa		5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	ARHGAP44	Q17R89	818 aa		5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	BHLHA9	Q7RTU4	235 aa		5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	BRAP	Q7Z569	592 aa		5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	LILRA3	Q8N6C8	439 aa	Predicted RBP	5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	RPGR	Q92834	1020 aa	Known RBP	5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	NDC1	Q9BTX1	674 aa		5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	ACSS2	Q9NR19	701 aa		5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	INSL6	Q9Y581	213 aa		5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.33	□□□□□ -1.56
RSF1-210	ENST00000531768	ZNF185	O15231	689 aa		5.32	□□□□□ -1.56
RSF1-210	ENST00000531768	CFB	P00751	764 aa		5.32	□□□□□ -1.56
RSF1-210	ENST00000531768	APOBEC3A	P31941	199 aa	Predicted RBP	5.32	□□□□□ -1.56
RSF1-210	ENST00000531768	AVPR1B	P47901	424 aa		5.32	□□□□□ -1.56
RSF1-210	ENST00000531768	PRR16	Q569H4	304 aa		5.32	□□□□□ -1.56
RSF1-210	ENST00000531768	FGD2	Q7Z6J4	655 aa		5.32	□□□□□ -1.56
RSF1-210	ENST00000531768	LCORL	Q8N3X6	602 aa		5.32	□□□□□ -1.56
RSF1-210	ENST00000531768	GLB1L3	Q8NCI6	653 aa	Predicted RBP	5.32	□□□□□ -1.56
RSF1-210	ENST00000531768	LINC00476	Q8WZB0	136 aa		5.32	□□□□□ -1.56
RSF1-210	ENST00000531768	TUBGCP5	Q96RT8	1024 aa		5.32	□□□□□ -1.56
RSF1-210	ENST00000531768	OSBPL6	Q9BZF3	934 aa		5.32	□□□□□ -1.56
RSF1-210	ENST00000531768	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.32	□□□□□ -1.56
RSF1-210	ENST00000531768	SYNPO2	Q9UMS6	1093 aa		5.32	□□□□□ -1.56
RSF1-210	ENST00000531768		A0A0A6YYJ9	748 aa		5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	NRP1	O14786	923 aa		5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	KCNQ2	O43526	872 aa		5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	DNAJC6	O75061	913 aa		5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	NME9	Q86XW9	330 aa		5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	CMTR2	Q8IYT2	770 aa	Known RBP	5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	COQ10A	Q96MF6	247 aa		5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	UIMC1	Q96RL1	719 aa		5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	RSAD1	Q9HA92	442 aa		5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	AKIP1	Q9NQ31	210 aa		5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	ING3	Q9NXR8	418 aa		5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	TRPM5	Q9NZQ8	1165 aa		5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	CHST2	Q9Y4C5	530 aa		5.31	□□□□□ -1.56
RSF1-210	ENST00000531768	GAGE12B	A1L429	117 aa		5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	GAGE12H	A6NDE8	117 aa		5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	RNASET2	O00584	256 aa	Known RBP	5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	NCR1	O76036	304 aa		5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	STK10	O94804	968 aa	Known RBP	5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	CYP17A1	P05093	508 aa		5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	GAA	P10253	952 aa		5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	SEC24C	P53992	1094 aa		5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	EPHA7	Q15375	998 aa		5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	MAN2A1	Q16706	1144 aa		5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	EPHA10	Q5JZY3	1008 aa		5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	KANSL1	Q7Z3B3	1105 aa		5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	GDF7	Q7Z4P5	450 aa		5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	FAM83A	Q86UY5	434 aa		5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	FAM98A	Q8NCA5	519 aa	Known RBP	5.3	□□□□□ -1.56
RSF1-210	ENST00000531768	SOX7	Q9BT81	388 aa		5.3	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms