RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 NECTIN4Q96NY8 510 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 MAP7D2Q96T17 732 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 HINFPQ9BQA5 517 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 TRAIPQ9BWF2 469 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 GLT8D2Q9H1C3 349 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 UNC45AQ9H3U1 944 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 NRDE2Q9H7Z3 1164 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 UPF2Q9HAU5 1272 aaKnown RBP10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 DISC1Q9NRI5 854 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 TBC1D13Q9NVG8 400 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 DLL3Q9NYJ7 618 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 LIMD1Q9UGP4 676 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 VWA8A3KMH1 1905 aa10.38□□□□□ -0.75
CHMP4A-205ENST00000531158 A0A087WZ62 844 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 CHMP2AO43633 222 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 N4BP1O75113 896 aaKnown RBP10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 ZC3H11AO75152 810 aaKnown RBP eCLIP10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 CXCL14O95715 111 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 CTSAP10619 480 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 PTPN14Q15678 1187 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 ASTLQ6HA08 431 aaPredicted RBP10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 CES5AQ6NT32 575 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 TMC5Q6UXY8 1006 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 ZNF280BQ86YH2 543 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 KSR1Q8IVT5 923 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 TDRD5Q8NAT2 981 aaKnown RBP10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 TMEM169Q96HH4 297 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 IGSF21Q96ID5 467 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 FAM167AQ96KS9 214 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 NOTCH4Q99466 2003 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 FDXACB1Q9BRP7 624 aaPredicted RBP10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 DAXXQ9UER7 740 aaPredicted RBP10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 SAMM50Q9Y512 469 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 TRIP11Q15643 1979 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 GPR179Q6PRD1 2367 aa10.37□□□□□ -0.75
CHMP4A-205ENST00000531158 PRPF3O43395 683 aaKnown RBP10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 LILRB3O75022 631 aa10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 OFD1O75665 1012 aa10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 PSMD10O75832 226 aa10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 LMNAP02545 664 aaKnown RBP10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 GALTP07902 379 aa10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 MTHFRP42898 656 aa10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 SLC11A1P49279 550 aa10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 ALDH7A1P49419 539 aaKnown RBP10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 NBR1Q14596 966 aa10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 RSPO4Q2I0M5 234 aaPredicted RBP10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 DDX53Q86TM3 631 aaKnown RBP10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 NLRP7Q8WX94 980 aa10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 RIT2Q99578 217 aa10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 MRPL9Q9BYD2 267 aaKnown RBP10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 NIFKQ9BYG3 293 aaKnown RBP10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 C6orf50Q9HD87 102 aa10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 USTQ9Y2C2 406 aa10.36□□□□□ -0.75
CHMP4A-205ENST00000531158 SPTBN2O15020 2390 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 NARSO43776 548 aaKnown RBP10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 DDHD2O94830 711 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 TDP2O95551 362 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 EFEMP2O95967 443 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 CNPP09543 421 aaKnown RBP10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 TMOD1P28289 359 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 CA8P35219 290 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 CLCN4P51793 760 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 POLGP54098 1239 aaPredicted RBP10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 TBC1D8BQ0IIM8 1120 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 BECN1Q14457 450 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 MTERF2Q49AM1 385 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 BMP2KLQ5H9B9 411 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 RNF20Q5VTR2 975 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 POTEGQ6S5H5 508 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 AGMOQ6ZNB7 445 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 Q6ZUG5 572 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 ANO5Q75V66 913 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 GPR149Q86SP6 731 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 ZNF579Q8NAF0 562 aaKnown RBP10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 KCNB2Q92953 911 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 BRF1Q92994 677 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 KLHL5Q96PQ7 755 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 IFT122Q9HBG6 1241 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 CHST12Q9NRB3 414 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 FAM105AQ9NUU6 356 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 DZANK1Q9NVP4 752 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 DACT1Q9NYF0 836 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 VPS54Q9P1Q0 977 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 SEPT9Q9UHD8 586 aaPredicted RBP10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 DBR1Q9UK59 544 aaKnown RBP10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 INPP5FQ9Y2H2 1132 aa10.35□□□□□ -0.75
CHMP4A-205ENST00000531158 F8W810 466 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 M0R2N6 131 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 GAS7O60861 476 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 ZNF623O75123 536 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 AOC1P19801 751 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 SFNP31947 248 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 CLCN5P51795 746 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 JAK3P52333 1124 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 NPY5RQ15761 445 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 NOMO2Q5JPE7 1267 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 ATAT1Q5SQI0 421 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 UBXN11Q5T124 520 aa10.34□□□□□ -0.75
CHMP4A-205ENST00000531158 LRCH2Q5VUJ6 765 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms