RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 DDX53Q86TM3 631 aaKnown RBP10.17□□□□□ -0.78
VPS11-203ENST00000529545 SIX5Q8N196 739 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 DTWD2Q8NBA8 298 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 EPAS1Q99814 870 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 ADAM33Q9BZ11 813 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 ZBP1Q9H171 429 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 ADAMTS10Q9H324 1103 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 SFXN1Q9H9B4 322 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 GABBR1Q9UBS5 961 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 STK39Q9UEW8 545 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 PCDHGA10Q9Y5H3 936 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 IRAK3Q9Y616 596 aa10.17□□□□□ -0.78
VPS11-203ENST00000529545 FAM86B1E9PN63 330 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 DHX15O43143 795 aaKnown RBP10.16□□□□□ -0.78
VPS11-203ENST00000529545 PI15O43692 258 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 FAM86B2P0C5J1 330 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 CTSAP10619 480 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 DARSP14868 501 aaKnown RBP10.16□□□□□ -0.78
VPS11-203ENST00000529545 SETQ01105 290 aaPredicted RBP10.16□□□□□ -0.78
VPS11-203ENST00000529545 RNASELQ05823 741 aaKnown RBP10.16□□□□□ -0.78
VPS11-203ENST00000529545 JAKMIP3Q5VZ66 844 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 CWF19L1Q69YN2 538 aaKnown RBP10.16□□□□□ -0.78
VPS11-203ENST00000529545 KANK3Q6NY19 840 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 ELMSAN1Q6PJG2 1045 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 GLB1LQ6UWU2 654 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 GPR149Q86SP6 731 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 ZNF598Q86UK7 904 aaKnown RBP10.16□□□□□ -0.78
VPS11-203ENST00000529545 SGMS1Q86VZ5 419 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 LRRC71Q8N4P6 559 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 SLC22A17Q8WUG5 538 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 NLRP7Q8WX94 980 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 AUTS2Q8WXX7 1259 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 IGSF21Q96ID5 467 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 EMILIN2Q9BXX0 1053 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 CHST12Q9NRB3 414 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 IGSF9Q9P2J2 1179 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 DUSP12Q9UNI6 340 aa10.16□□□□□ -0.78
VPS11-203ENST00000529545 V9GY48 417 aaPredicted RBP10.16□□□□□ -0.78
VPS11-203ENST00000529545 CNTNAP5Q8WYK1 1306 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 LMNAP02545 664 aaKnown RBP10.15□□□□□ -0.78
VPS11-203ENST00000529545 CYP3A4P08684 503 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 KLRC2P26717 231 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 DNM2P50570 870 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 GPC3P51654 580 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 TBC1D8BQ0IIM8 1120 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 RTN1Q16799 776 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 TWF2Q6IBS0 349 aaKnown RBP10.15□□□□□ -0.78
VPS11-203ENST00000529545 DGLUCYQ7Z3D6 616 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 STAMQ92783 540 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 ZNF668Q96K58 619 aaPredicted RBP10.15□□□□□ -0.78
VPS11-203ENST00000529545 HINFPQ9BQA5 517 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 LRRC2Q9BYS8 371 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 GCOM2Q9BZD3 368 aaPredicted RBP10.15□□□□□ -0.78
VPS11-203ENST00000529545 INO80BQ9C086 356 aaPredicted RBP10.15□□□□□ -0.78
VPS11-203ENST00000529545 KCNK12Q9HB15 430 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 BARHL2Q9NY43 387 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 DPP7Q9UHL4 492 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 VPS9D1Q9Y2B5 631 aa10.15□□□□□ -0.78
VPS11-203ENST00000529545 IGLV3-22A0A075B6J6 115 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 WDR64B1ANS9 1081 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 ZBTB43O43298 467 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 OATP04181 439 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 GALTP07902 379 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 NPR3P17342 541 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 FGFR4P22455 802 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 SFPQP23246 707 aaKnown RBP eCLIP10.14□□□□□ -0.79
VPS11-203ENST00000529545 PHKA2P46019 1235 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 CLK2P49760 499 aaKnown RBP10.14□□□□□ -0.79
VPS11-203ENST00000529545 LETM2Q2VYF4 491 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 NOMO2Q5JPE7 1267 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 ZC3H14Q6PJT7 736 aaKnown RBP10.14□□□□□ -0.79
VPS11-203ENST00000529545 APOA5Q6Q788 366 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 C15orf39Q6ZRI6 1047 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 URGCPQ8TCY9 931 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 CCDC12Q8WUD4 166 aaPredicted RBP10.14□□□□□ -0.79
VPS11-203ENST00000529545 GBP3Q9H0R5 595 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 C6orf50Q9HD87 102 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 TBC1D13Q9NVG8 400 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 WNT16Q9UBV4 365 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 INPP5FQ9Y2H2 1132 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 DENND4AQ7Z401 1863 aa10.14□□□□□ -0.79
VPS11-203ENST00000529545 PPP1R3GB7ZBB8 358 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 SLC27A2O14975 620 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 SFNP31947 248 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 GBP2P32456 591 aaPredicted RBP10.13□□□□□ -0.79
VPS11-203ENST00000529545 RAB27AP51159 221 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 PRKCEQ02156 737 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 PUM1Q14671 1186 aaKnown RBP eCLIP10.13□□□□□ -0.79
VPS11-203ENST00000529545 PTPN14Q15678 1187 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 PRR16Q569H4 304 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 RNF20Q5VTR2 975 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 TMEM173Q86WV6 379 aaPredicted RBP10.13□□□□□ -0.79
VPS11-203ENST00000529545 KIAA2013Q8IYS2 634 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 REXO1Q8N1G1 1221 aaKnown RBP10.13□□□□□ -0.79
VPS11-203ENST00000529545 LINC01465Q8N7H1 131 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 EXOC6Q8TAG9 804 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 PGBD4Q96DM1 585 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 KLHL5Q96PQ7 755 aa10.13□□□□□ -0.79
VPS11-203ENST00000529545 FAM193BQ96PV7 902 aaPredicted RBP10.13□□□□□ -0.79
VPS11-203ENST00000529545 TRAIPQ9BWF2 469 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms