RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 C1orf228Q6PIY5 440 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 FAM217BQ9NTX9 383 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 GTSE1Q9NYZ3 720 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 TRPM1Q7Z4N2 1603 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 WDR19Q8NEZ3 1342 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 PVALEFA0A1B0GWK0 134 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 ARHGEF37A1IGU5 675 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 ZBTB7AO95365 584 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 ATP1A1P05023 1023 aaKnown RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 P4HBP07237 508 aaKnown RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 QARSP47897 775 aaKnown RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 KRT33BQ14525 404 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 CC2D1AQ6P1N0 951 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 BZW1Q7L1Q6 419 aaKnown RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 SRBD1Q8N5C6 995 aaKnown RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 SYT2Q8N9I0 419 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 DHX38Q92620 1227 aaKnown RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 IFT43Q96FT9 208 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 FAM84BQ96KN1 310 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 FAM20AQ96MK3 541 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 SPATA33Q96N06 139 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 MMP19Q99542 508 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 EFHD1Q9BUP0 239 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 ANGPTL2Q9UKU9 493 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 TADA3O75528 432 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 CALB1P05937 261 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 TAC1P20366 129 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 CIITAP33076 1130 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 PSMC1P62191 440 aaKnown RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 ZNF710Q8N1W2 664 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 GIMAP8Q8ND71 665 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 C1orf54Q8WWF1 131 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 FAM167AQ96KS9 214 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 TUBB6Q9BUF5 446 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 ACTR5Q9H9F9 607 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-220ENST00000529526 KLHL11Q9NVR0 708 aa8.67□□□□□ -1.02
CTNND1-220ENST00000529526 H0Y3Z8 333 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 IPO5O00410 1097 aaKnown RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 KRT37O76014 449 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 CHEK2O96017 543 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 KRT76Q01546 638 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 CDR2Q01850 454 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 GPS1Q13098 491 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 DRP2Q13474 957 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 MTF1Q14872 753 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 LRRC14Q15048 493 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 ARHGEF6Q15052 776 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 GRAMD1BQ3KR37 738 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 GLE1Q53GS7 698 aaKnown RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 SYCP2LQ5T4T6 812 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 KRT80Q6KB66 452 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 AFG1LQ8WV93 481 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 OTUD5Q96G74 571 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 MOSPD1Q9UJG1 213 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 ZDHHC9Q9Y397 364 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 ARHGAP31Q2M1Z3 1444 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 EMSYQ7Z589 1322 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 FAM205CA6NFA0 338 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 HADHAP40939 763 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 HNRNPH2P55795 449 aaKnown RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 TMEM259Q4ZIN3 620 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 ANKRD40Q6AI12 368 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 BEST2Q8NFU1 509 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 SARS2Q9NP81 518 aaKnown RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 SUCLA2Q9P2R7 463 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 MIF4GDA9UHW6 222 aaKnown RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 SPAG7O75391 227 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 NOP14P78316 857 aaKnown RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 GLYCTKQ8IVS8 523 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 SERPINI1Q99574 410 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 ISCA1Q9BUE6 129 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 KIAA1586Q9HCI6 787 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 CTIFO43310 598 aaKnown RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 PPM1NQ8N819 430 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 DPF2Q92785 391 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 NCLNQ969V3 563 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 MYCBPQ99417 103 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 SH2D3AQ9BRG2 576 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 TRIM55Q9BYV6 548 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 RPAP3Q9H6T3 665 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 SLC8A2Q9UPR5 921 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 MOCS2O96007 188 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 NMT1P30419 496 aaKnown RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 ANO4Q32M45 955 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 SZRD1Q7Z422 152 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 ZBED8Q8IZ13 594 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 PSPC1Q8WXF1 523 aaKnown RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 MXD3Q9BW11 206 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 EDEM3Q9BZQ6 932 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 TOPORSQ9NS56 1045 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-220ENST00000529526 ZFP69BQ9UJL9 534 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 MID2Q9UJV3 735 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 DCTN4Q9UJW0 460 aa8.66□□□□□ -1.02
CTNND1-220ENST00000529526 SNX2O60749 519 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 LCP1P13796 627 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 POLE2P56282 527 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 PDIA2Q13087 525 aaKnown RBP8.65□□□□□ -1.02
CTNND1-220ENST00000529526 E2F4Q16254 413 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 ATG9AQ7Z3C6 839 aa8.65□□□□□ -1.02
CTNND1-220ENST00000529526 RPAINQ86UA6 219 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms