RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 UIMC1Q96RL1 719 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 SMAD5Q99717 465 aaKnown RBP7.82□□□□□ -1.16
PCF11-202ENST00000528336 DPYSL5Q9BPU6 564 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 MENTQ9BUN1 341 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 CCM2LQ9NUG4 571 aaPredicted RBP7.82□□□□□ -1.16
PCF11-202ENST00000528336 PPP4R1LQ9P1A2 415 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 PUF60Q9UHX1 559 aaKnown RBP7.82□□□□□ -1.16
PCF11-202ENST00000528336 CDY2AQ9Y6F7 541 aa7.82□□□□□ -1.16
PCF11-202ENST00000528336 NRG3P56975 720 aa7.81□□□□□ -1.16
PCF11-202ENST00000528336 TCIRG1Q13488 830 aa7.81□□□□□ -1.16
PCF11-202ENST00000528336 NFYCQ13952 458 aa7.81□□□□□ -1.16
PCF11-202ENST00000528336 SPIDRQ14159 915 aa7.81□□□□□ -1.16
PCF11-202ENST00000528336 CLUL1Q15846 466 aa7.81□□□□□ -1.16
PCF11-202ENST00000528336 BRDTQ58F21 947 aaPredicted RBP7.81□□□□□ -1.16
PCF11-202ENST00000528336 SLFN13Q68D06 897 aa7.81□□□□□ -1.16
PCF11-202ENST00000528336 GLB1LQ6UWU2 654 aa7.81□□□□□ -1.16
PCF11-202ENST00000528336 CBARPQ8N350 705 aaPredicted RBP7.81□□□□□ -1.16
PCF11-202ENST00000528336 SLC7A6OSQ96CW6 309 aaPredicted RBP7.81□□□□□ -1.16
PCF11-202ENST00000528336 ORAI2Q96SN7 254 aa7.81□□□□□ -1.16
PCF11-202ENST00000528336 BDH2Q9BUT1 245 aa7.81□□□□□ -1.16
PCF11-202ENST00000528336 SEC61A2Q9H9S3 476 aa7.81□□□□□ -1.16
PCF11-202ENST00000528336 MATN2O00339 956 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 CDC14BO60729 498 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 LY86O95711 162 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 GAAP10253 952 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 ADCY7P51828 1080 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 BPIFB4P59827 614 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 MRPS9P82933 396 aaKnown RBP7.8□□□□□ -1.16
PCF11-202ENST00000528336 HGFACQ04756 655 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 TAX1BP1Q86VP1 789 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 GLB1L2Q8IW92 636 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 AMOTL1Q8IY63 956 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 ANKRD53Q8N9V6 530 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 PIK3C3Q8NEB9 887 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 AUTS2Q8WXX7 1259 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 CFHR4Q92496 578 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 LPPQ93052 612 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 SLC6A15Q9H2J7 730 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 MKS1Q9NXB0 559 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 OAZ3Q9UMX2 235 aa7.8□□□□□ -1.16
PCF11-202ENST00000528336 GABRDO14764 452 aa7.79□□□□□ -1.16
PCF11-202ENST00000528336 SEC24DO94855 1032 aaPredicted RBP7.79□□□□□ -1.16
PCF11-202ENST00000528336 OSMP13725 252 aa7.79□□□□□ -1.16
PCF11-202ENST00000528336 CR2P20023 1033 aa7.79□□□□□ -1.16
PCF11-202ENST00000528336 CCDC178Q5BJE1 867 aa7.79□□□□□ -1.16
PCF11-202ENST00000528336 KRT40Q6A162 431 aa7.79□□□□□ -1.16
PCF11-202ENST00000528336 KRTAP1-3Q8IUG1 177 aa7.79□□□□□ -1.16
PCF11-202ENST00000528336 GIMAP8Q8ND71 665 aaPredicted RBP7.79□□□□□ -1.16
PCF11-202ENST00000528336 PPP1R14CQ8TAE6 165 aa7.79□□□□□ -1.16
PCF11-202ENST00000528336 MEGF9Q9H1U4 602 aa7.79□□□□□ -1.16
PCF11-202ENST00000528336 IFT122Q9HBG6 1241 aa7.79□□□□□ -1.16
PCF11-202ENST00000528336 ING3Q9NXR8 418 aa7.79□□□□□ -1.16
PCF11-202ENST00000528336 TOX4O94842 621 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 MTHFD2P13995 350 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 PLP2Q04941 152 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 ACAP2Q15057 778 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 MUM1Q2TAK8 710 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 INAVAQ3KP66 663 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 KCNK18Q7Z418 384 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 C1orf162Q8NEQ5 155 aaPredicted RBP7.78□□□□□ -1.16
PCF11-202ENST00000528336 TSPEARQ8WU66 669 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 RELTQ969Z4 430 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 FAXDC2Q96IV6 333 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 SLC2A13Q96QE2 648 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 ASPSCR1Q9BZE9 553 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 DDX56Q9NY93 547 aaKnown RBP7.78□□□□□ -1.16
PCF11-202ENST00000528336 NCDNQ9UBB6 729 aa7.78□□□□□ -1.16
PCF11-202ENST00000528336 SLC26A4O43511 780 aa7.77□□□□□ -1.17
PCF11-202ENST00000528336 ALDH1A2O94788 518 aa7.77□□□□□ -1.17
PCF11-202ENST00000528336 KIR2DL3P43628 341 aa7.77□□□□□ -1.17
PCF11-202ENST00000528336 CIR1Q86X95 450 aaPredicted RBP7.77□□□□□ -1.17
PCF11-202ENST00000528336 SHCBP1Q8NEM2 672 aa7.77□□□□□ -1.17
PCF11-202ENST00000528336 FUBP3Q96I24 572 aaKnown RBP eCLIP7.77□□□□□ -1.17
PCF11-202ENST00000528336 ACE2Q9BYF1 805 aaPredicted RBP7.77□□□□□ -1.17
PCF11-202ENST00000528336 C14orf93Q9H972 538 aaKnown RBP7.77□□□□□ -1.17
PCF11-202ENST00000528336 RAPGEFL1Q9UHV5 662 aa7.77□□□□□ -1.17
PCF11-202ENST00000528336 A0A1W2PR48 441 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 FOXD2O60548 495 aaPredicted RBP7.76□□□□□ -1.17
PCF11-202ENST00000528336 PRAMEF4O60810 478 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 CFBP00751 764 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 ITGB3P05106 788 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 VSIG10L2P0DP72 767 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 SAFB2Q14151 953 aaKnown RBP eCLIP7.76□□□□□ -1.17
PCF11-202ENST00000528336 PCBP2Q15366 365 aaKnown RBP eCLIP7.76□□□□□ -1.17
PCF11-202ENST00000528336 UBE3CQ15386 1083 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 PTPN21Q16825 1174 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 LILRA6Q6PI73 481 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 UNC5BQ8IZJ1 945 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 PPM1NQ8N819 430 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 STAG1Q8WVM7 1258 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 RABGGTAQ92696 567 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 GPHA2Q96T91 129 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 PLA2G12BQ9BX93 195 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 AGO3Q9H9G7 860 aaKnown RBP7.76□□□□□ -1.17
PCF11-202ENST00000528336 GPR45Q9Y5Y3 372 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 TNKSO95271 1327 aa7.76□□□□□ -1.17
PCF11-202ENST00000528336 SHTN1A0MZ66 631 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 PPM1GO15355 546 aaPredicted RBP7.75□□□□□ -1.17
PCF11-202ENST00000528336 GPR42O15529 346 aa7.75□□□□□ -1.17
PCF11-202ENST00000528336 XPOTO43592 962 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms