RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 NSRP1Q9H0G5 558 aaKnown RBP16.21■□□□□ 0.19
USP47-207ENST00000527733 KCNK9Q9NPC2 374 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 TTLL3Q9Y4R7 772 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 RRN3P2A6NIE6 340 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 UAP1Q16222 522 aaPredicted RBP16.21■□□□□ 0.19
USP47-207ENST00000527733 SNRNP35Q16560 246 aaKnown RBP16.21■□□□□ 0.19
USP47-207ENST00000527733 DNAJC21Q5F1R6 531 aaKnown RBP16.21■□□□□ 0.19
USP47-207ENST00000527733 EFCAB12Q6NXP0 572 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 ILDR1Q86SU0 546 aaPredicted RBP16.21■□□□□ 0.19
USP47-207ENST00000527733 ACAP3Q96P50 834 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 RUSC1Q9BVN2 902 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 AGO4Q9HCK5 861 aaKnown RBP16.21■□□□□ 0.19
USP47-207ENST00000527733 MANSC4A6NHS7 340 aaPredicted RBP16.21■□□□□ 0.19
USP47-207ENST00000527733 PGRMC1O00264 195 aaKnown RBP16.21■□□□□ 0.19
USP47-207ENST00000527733 ADCY8P40145 1251 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 ACOT2P49753 483 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 RUFY4Q6ZNE9 571 aa16.21■□□□□ 0.19
USP47-207ENST00000527733 MAGOHBQ96A72 148 aaKnown RBP16.21■□□□□ 0.19
USP47-207ENST00000527733 KLRG2A4D1S0 409 aaPredicted RBP16.2■□□□□ 0.18
USP47-207ENST00000527733 TGFB3P10600 412 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 VPS41P49754 854 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 LRRC71Q8N4P6 559 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 FAM76AQ8TAV0 307 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 PIN4Q9Y237 131 aaKnown RBP16.2■□□□□ 0.18
USP47-207ENST00000527733 STRNO43815 780 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 CYP2C9P11712 490 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 TOGARAM2Q6ZUX3 1019 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 GABPB2Q8TAK5 448 aaPredicted RBP16.2■□□□□ 0.18
USP47-207ENST00000527733 CYP2W1Q8TAV3 490 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 KIF12Q96FN5 646 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 PBKQ96KB5 322 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 PRMT7Q9NVM4 692 aaPredicted RBP16.2■□□□□ 0.18
USP47-207ENST00000527733 GOLGA6BA6NDN3 693 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 CPT1AP50416 773 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 PPIL2Q13356 520 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 RNF187Q5TA31 235 aaPredicted RBP16.2■□□□□ 0.18
USP47-207ENST00000527733 SLC30A10Q6XR72 485 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 NIPA1Q7RTP0 329 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 TSC1Q92574 1164 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 CPA4Q9UI42 421 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 COL9A3Q14050 684 aaPredicted RBP16.2■□□□□ 0.18
USP47-207ENST00000527733 NR1I3Q14994 352 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 PHLDB2Q86SQ0 1253 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 NLGN2Q8NFZ4 835 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 RABGGTAQ92696 567 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 ALS2Q96Q42 1657 aa16.2■□□□□ 0.18
USP47-207ENST00000527733 RGPD1P0DJD0 1748 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 FAM86B1E9PN63 330 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 FAM86B2P0C5J1 330 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 HSPA6P17066 643 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 FMO5P49326 533 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 PDXDC1Q6P996 788 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 FBXO16Q8IX29 292 aaPredicted RBP16.19■□□□□ 0.18
USP47-207ENST00000527733 CNOT8Q9UFF9 292 aaKnown RBP16.19■□□□□ 0.18
USP47-207ENST00000527733 ARPP19P56211 112 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 LMNB2Q03252 620 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 RBM43Q6ZSC3 357 aaKnown RBP16.19■□□□□ 0.18
USP47-207ENST00000527733 C4orf19Q8IY42 314 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 RPUSD2Q8IZ73 545 aaKnown RBP16.19■□□□□ 0.18
USP47-207ENST00000527733 RUNDC3BQ96NL0 473 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 NKIRAS1Q9NYS0 192 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 RGPD2P0DJD1 1756 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 MAN1A1P33908 653 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 LMBRD2Q68DH5 695 aaPredicted RBP16.19■□□□□ 0.18
USP47-207ENST00000527733 CATSPERGQ6ZRH7 1159 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 DPH5Q9H2P9 285 aa16.19■□□□□ 0.18
USP47-207ENST00000527733 GPC5P78333 572 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 SARNPP82979 210 aaKnown RBP16.18■□□□□ 0.18
USP47-207ENST00000527733 CASC4Q6P4E1 433 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 METTL7BQ6UX53 244 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 ADGRG1Q9Y653 693 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 IRF6O14896 467 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 CXCR5P32302 372 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 SOX5P35711 763 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 GFPT1Q06210 699 aaPredicted RBP16.18■□□□□ 0.18
USP47-207ENST00000527733 KRT12Q99456 494 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 A1CFQ9NQ94 594 aaKnown RBP16.18■□□□□ 0.18
USP47-207ENST00000527733 DAAM1Q9Y4D1 1078 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 ITIH6Q6UXX5 1313 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 PASKQ96RG2 1323 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 ROBO3Q96MS0 1386 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 EIF3CLB5ME19 914 aaKnown RBP16.18■□□□□ 0.18
USP47-207ENST00000527733 BTNL9Q6UXG8 535 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 NME8Q8N427 588 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 EIF3CQ99613 913 aaKnown RBP16.18■□□□□ 0.18
USP47-207ENST00000527733 H7C0C1 242 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 ATP5OP48047 213 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 SLC26A2P50443 739 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 GIT2Q14161 759 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 THEM5Q8N1Q8 247 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 CCDC97Q96F63 343 aaPredicted RBP16.18■□□□□ 0.18
USP47-207ENST00000527733 GDAP1L1Q96MZ0 367 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 TARS2Q9BW92 718 aaKnown RBP16.18■□□□□ 0.18
USP47-207ENST00000527733 OGFRQ9NZT2 677 aa16.18■□□□□ 0.18
USP47-207ENST00000527733 RSPH10B2B2RC85 870 aa16.17■□□□□ 0.18
USP47-207ENST00000527733 RSPH10BP0C881 870 aa16.17■□□□□ 0.18
USP47-207ENST00000527733 RFX6Q8HWS3 928 aa16.17■□□□□ 0.18
USP47-207ENST00000527733 BBOF1Q8ND07 529 aa16.17■□□□□ 0.18
USP47-207ENST00000527733 ALDH1A1P00352 501 aa16.17■□□□□ 0.18
USP47-207ENST00000527733 KRT1P04264 644 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms