RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 REV3LO60673 3130 aa29.25■■■□□ 2.27
TSPAN4-217ENST00000527644 VPS37CA5D8V6 355 aaPredicted RBP29.25■■■□□ 2.27
TSPAN4-217ENST00000527644 ZNF623O75123 536 aa29.25■■■□□ 2.27
TSPAN4-217ENST00000527644 MRPS5P82675 430 aaKnown RBP29.25■■■□□ 2.27
TSPAN4-217ENST00000527644 MAEAQ7L5Y9 396 aa29.25■■■□□ 2.27
TSPAN4-217ENST00000527644 KLHL23Q8NBE8 558 aa29.25■■■□□ 2.27
TSPAN4-217ENST00000527644 RSPH1Q8WYR4 309 aa29.25■■■□□ 2.27
TSPAN4-217ENST00000527644 SNX21Q969T3 373 aa29.25■■■□□ 2.27
TSPAN4-217ENST00000527644 GPRC5CQ9NQ84 441 aa29.25■■■□□ 2.27
TSPAN4-217ENST00000527644 DDX19AQ9NUU7 478 aaKnown RBP29.25■■■□□ 2.27
TSPAN4-217ENST00000527644 PP2D1A8MPX8 630 aa29.24■■■□□ 2.27
TSPAN4-217ENST00000527644 ERLIN2O94905 339 aa29.24■■■□□ 2.27
TSPAN4-217ENST00000527644 AXLP30530 894 aa29.24■■■□□ 2.27
TSPAN4-217ENST00000527644 HOXA11P31270 313 aaPredicted RBP29.24■■■□□ 2.27
TSPAN4-217ENST00000527644 NCBP1Q09161 790 aaKnown RBP29.24■■■□□ 2.27
TSPAN4-217ENST00000527644 CLLU1OSQ5K130 101 aa29.24■■■□□ 2.27
TSPAN4-217ENST00000527644 LRRC43Q8N309 656 aa29.24■■■□□ 2.27
TSPAN4-217ENST00000527644 BHMT2Q9H2M3 363 aa29.24■■■□□ 2.27
TSPAN4-217ENST00000527644 CWH43Q9H720 699 aa29.24■■■□□ 2.27
TSPAN4-217ENST00000527644 ALG13Q9NP73 1137 aaKnown RBP29.24■■■□□ 2.27
TSPAN4-217ENST00000527644 KIAA1671Q9BY89 1806 aa29.24■■■□□ 2.27
TSPAN4-217ENST00000527644 INO80B-WBP1J3KQ70 363 aa29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 BMP15O95972 392 aa29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 ITGB1P05556 798 aa29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 LAG3P18627 525 aa29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 CDC25AP30304 524 aa29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 MBTD1Q05BQ5 628 aa29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 CSPP1Q1MSJ5 1256 aa29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 TJAP1Q5JTD0 557 aa29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 SPPL3Q8TCT6 385 aa29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 HLA-CQ95604 372 aa29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 ASB2Q96Q27 587 aa29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 NSUN3Q9H649 340 aaKnown RBP29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 DNM3Q9UQ16 869 aa29.23■■■□□ 2.27
TSPAN4-217ENST00000527644 SYT1P21579 422 aa29.22■■■□□ 2.27
TSPAN4-217ENST00000527644 LRRC55Q6ZSA7 311 aa29.22■■■□□ 2.27
TSPAN4-217ENST00000527644 COLGALT1Q8NBJ5 622 aa29.22■■■□□ 2.27
TSPAN4-217ENST00000527644 HELQQ8TDG4 1101 aa29.22■■■□□ 2.27
TSPAN4-217ENST00000527644 PGBD4Q96DM1 585 aa29.22■■■□□ 2.27
TSPAN4-217ENST00000527644 MMTAG2Q9BU76 263 aaKnown RBP29.22■■■□□ 2.27
TSPAN4-217ENST00000527644 PCDHB2Q9Y5E7 798 aa29.22■■■□□ 2.27
TSPAN4-217ENST00000527644 SPTBN5Q9NRC6 3674 aaKnown RBP29.21■■■□□ 2.27
TSPAN4-217ENST00000527644 VWA3AA6NCI4 1184 aa29.21■■■□□ 2.27
TSPAN4-217ENST00000527644 DLL1O00548 723 aa29.21■■■□□ 2.27
TSPAN4-217ENST00000527644 TSPAN1O60635 241 aa29.21■■■□□ 2.27
TSPAN4-217ENST00000527644 EYA4O95677 639 aa29.21■■■□□ 2.27
TSPAN4-217ENST00000527644 AAK1Q2M2I8 961 aa29.21■■■□□ 2.27
TSPAN4-217ENST00000527644 CCDC51Q96ER9 411 aa29.21■■■□□ 2.27
TSPAN4-217ENST00000527644 MRPL9Q9BYD2 267 aaKnown RBP29.21■■■□□ 2.27
TSPAN4-217ENST00000527644 HCSTQ9UBK5 93 aa29.21■■■□□ 2.27
TSPAN4-217ENST00000527644 LRRIQ4A6NIV6 560 aa29.2■■■□□ 2.26
TSPAN4-217ENST00000527644 UBXN11Q5T124 520 aa29.2■■■□□ 2.26
TSPAN4-217ENST00000527644 NOTUMQ6P988 496 aa29.2■■■□□ 2.26
TSPAN4-217ENST00000527644 MRPL10Q7Z7H8 261 aaKnown RBP29.2■■■□□ 2.26
TSPAN4-217ENST00000527644 KCTD17Q8N5Z5 321 aa29.2■■■□□ 2.26
TSPAN4-217ENST00000527644 SYMPKQ92797 1274 aaKnown RBP29.2■■■□□ 2.26
TSPAN4-217ENST00000527644 LPPQ93052 612 aa29.2■■■□□ 2.26
TSPAN4-217ENST00000527644 MYO7AQ13402 2215 aa29.19■■■□□ 2.26
TSPAN4-217ENST00000527644 E9PMD0 336 aa29.19■■■□□ 2.26
TSPAN4-217ENST00000527644 UBE3AQ05086 875 aa29.19■■■□□ 2.26
TSPAN4-217ENST00000527644 CAMK1Q14012 370 aa29.19■■■□□ 2.26
TSPAN4-217ENST00000527644 AMHR2Q16671 573 aa29.19■■■□□ 2.26
TSPAN4-217ENST00000527644 TCEAL5Q5H9L2 206 aa29.19■■■□□ 2.26
TSPAN4-217ENST00000527644 HYIQ5T013 277 aa29.19■■■□□ 2.26
TSPAN4-217ENST00000527644 GLB1LQ6UWU2 654 aa29.19■■■□□ 2.26
TSPAN4-217ENST00000527644 CNNM3Q8NE01 707 aa29.19■■■□□ 2.26
TSPAN4-217ENST00000527644 POF1BQ8WVV4 589 aa29.19■■■□□ 2.26
TSPAN4-217ENST00000527644 FOXD4L1Q9NU39 408 aa29.19■■■□□ 2.26
TSPAN4-217ENST00000527644 DNAJB1P25685 340 aa29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 TFF2Q03403 129 aa29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 PPP2R5AQ15172 486 aa29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 LONRF3Q496Y0 759 aa29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 CDCA2Q69YH5 1023 aaPredicted RBP29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 ZBTB8OSQ8IWT0 167 aa29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 THNSL1Q8IYQ7 743 aa29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 KIFAP3Q92845 792 aa29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 AK8Q96MA6 479 aa29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 COL25A1Q9BXS0 654 aaPredicted RBP29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 NT5C3AQ9H0P0 336 aa29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 C2orf40Q9H1Z8 148 aa29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 CUL9Q8IWT3 2517 aa29.18■■■□□ 2.26
TSPAN4-217ENST00000527644 OFD1O75665 1012 aa29.17■■■□□ 2.26
TSPAN4-217ENST00000527644 FGF18O76093 207 aa29.17■■■□□ 2.26
TSPAN4-217ENST00000527644 NAMPTP43490 491 aa29.17■■■□□ 2.26
TSPAN4-217ENST00000527644 SF3A1Q15459 793 aaKnown RBP29.17■■■□□ 2.26
TSPAN4-217ENST00000527644 KCNT2Q6UVM3 1135 aa29.17■■■□□ 2.26
TSPAN4-217ENST00000527644 BSNDQ8WZ55 320 aa29.17■■■□□ 2.26
TSPAN4-217ENST00000527644 CPB2Q96IY4 423 aa29.17■■■□□ 2.26
TSPAN4-217ENST00000527644 ZNF558Q96NG5 402 aa29.17■■■□□ 2.26
TSPAN4-217ENST00000527644 CSRNP2Q9H175 543 aa29.17■■■□□ 2.26
TSPAN4-217ENST00000527644 PRMT7Q9NVM4 692 aaPredicted RBP29.17■■■□□ 2.26
TSPAN4-217ENST00000527644 BRWD1Q9NSI6 2320 aa29.16■■■□□ 2.26
TSPAN4-217ENST00000527644 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.16■■■□□ 2.26
TSPAN4-217ENST00000527644 MEIS3P2A8K0S8 358 aa29.16■■■□□ 2.26
TSPAN4-217ENST00000527644 ARF4P18085 180 aaPredicted RBP29.16■■■□□ 2.26
TSPAN4-217ENST00000527644 NCLP19338 710 aaKnown RBP29.16■■■□□ 2.26
TSPAN4-217ENST00000527644 ZRSR1Q15695 479 aaKnown RBP29.16■■■□□ 2.26
TSPAN4-217ENST00000527644 NOMO2Q5JPE7 1267 aa29.16■■■□□ 2.26
TSPAN4-217ENST00000527644 PPP4R3CPQ6ZMV5 832 aa29.16■■■□□ 2.26
TSPAN4-217ENST00000527644 AGMOQ6ZNB7 445 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms