RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 NEXMIFQ5QGS0 1516 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 POTEFA5A3E0 1075 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 DCDC2CA8MYV0 355 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 H7C0S8 307 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 ATXN3P54252 364 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-216ENST00000527467 IFRD2Q12894 506 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-216ENST00000527467 TRIM25Q14258 630 aaKnown RBP7.7□□□□□ -1.18
CTNND1-216ENST00000527467 MAPRE1Q15691 268 aaKnown RBP7.7□□□□□ -1.18
CTNND1-216ENST00000527467 ODR4Q5SWX8 454 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 PIK3AP1Q6ZUJ8 805 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 CENPUQ71F23 418 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 DYMQ7RTS9 669 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 RYBPQ8N488 228 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-216ENST00000527467 CCDC24Q8N4L8 307 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 MDM1Q8TC05 714 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 RSPH1Q8WYR4 309 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 TTC17Q96AE7 1141 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 HINFPQ9BQA5 517 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 SCN3BQ9NY72 215 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 DKK3Q9UBP4 350 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 PCDHB13Q9Y5F0 798 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 E7ENQ6 273 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 GMPSP49915 693 aaPredicted RBP7.7□□□□□ -1.18
CTNND1-216ENST00000527467 MFSD14BQ5SR56 506 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 C16orf62Q7Z3J2 963 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 CEP95Q96GE4 821 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 ZFP42Q96MM3 310 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 FMO2Q99518 471 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 ANO3Q9BYT9 981 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 NDUFA13Q9P0J0 144 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 PHLPP2Q6ZVD8 1323 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 SLIT2O94813 1529 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 SEMA3EO15041 775 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 CCDC22O60826 627 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 CDC27P30260 824 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 ARFIP2P53365 341 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 BPIFB4P59827 614 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 RASSF7Q02833 373 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 DRP2Q13474 957 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 AOC3Q16853 763 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 PDIK1LQ8N165 341 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 SLC35F6Q8N357 371 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 DTX3LQ8TDB6 740 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 PBKQ96KB5 322 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 CCT7Q99832 543 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 RMI1Q9H9A7 625 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 METTL14Q9HCE5 456 aaKnown RBP7.7□□□□□ -1.18
CTNND1-216ENST00000527467 GINS2Q9Y248 185 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 TRIM17Q9Y577 477 aa7.7□□□□□ -1.18
CTNND1-216ENST00000527467 PNPLA7Q6ZV29 1317 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 COL5A2P05997 1499 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 TRPM1Q7Z4N2 1603 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 TYW5A2RUC4 315 aaKnown RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 KRT16P08779 473 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 CASP14P31944 242 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 RECQLP46063 649 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 SERPINH1P50454 418 aaKnown RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 CUL1Q13616 776 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 AARS2Q5JTZ9 985 aaKnown RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 KLHL24Q6TFL4 600 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 IKBIPQ70UQ0 350 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 LINC00116Q8NCU8 138 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 COG1Q8WTW3 980 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 DEPDC7Q96QD5 511 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 DBNDD1Q9H9R9 158 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 INTS13Q9NVM9 706 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 TBC1D7Q9P0N9 293 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 ARMCX3Q9UH62 379 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 CTIFO43310 598 aaKnown RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 SMARCA1P28370 1054 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 PMLP29590 882 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 PAPOLAP51003 745 aaKnown RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 PRAMEP78395 509 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 HDLBPQ00341 1268 aaKnown RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 IMPG1Q17R60 797 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 KLHL12Q53G59 568 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 KRT25Q7Z3Z0 450 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 KIAA0825Q8IV33 1275 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 SCG3Q8WXD2 468 aaKnown RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 EFHD2Q96C19 240 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 DHX36Q9H2U1 1008 aaKnown RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 TRPC7Q9HCX4 862 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 AP4S1Q9Y587 144 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 SAC3D1A6NKF1 404 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 RNF113AO15541 343 aaKnown RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 PCCAP05165 728 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 CLCN6P51797 869 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 HIC1Q14526 733 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 MESDQ14696 234 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 PPP1R2P3Q6NXS1 205 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 FAM47EQ6ZV65 393 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 EPM2AIP1Q7L775 607 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 TAF8Q7Z7C8 310 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 CALML6Q8TD86 181 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 PARD6BQ9BYG5 372 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 SPRTNQ9H040 489 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-216ENST00000527467 NT5C3AQ9H0P0 336 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 AZI2Q9H6S1 392 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 CHPF2Q9P2E5 772 aa7.69□□□□□ -1.18
CTNND1-216ENST00000527467 PDP2Q9P2J9 529 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms