RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 FIZ1Q96SL8 496 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 GCOM2Q9BZD3 368 aaPredicted RBP15.13■□□□□ 0.01
CD44-224ENST00000526669 MRPL44Q9H9J2 332 aaKnown RBP15.13■□□□□ 0.01
CD44-224ENST00000526669 IFT122Q9HBG6 1241 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 SLC39A2Q9NP94 309 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 PRKAG2Q9UGJ0 569 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 MAN1B1Q9UKM7 699 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 GDAQ9Y2T3 454 aa15.13■□□□□ 0.01
CD44-224ENST00000526669 TDRD15B5MCY1 1934 aaKnown RBP15.13■□□□□ 0.01
CD44-224ENST00000526669 INO80B-WBP1J3KQ70 363 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 PITPNM1O00562 1244 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 KIAA0355O15063 1070 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 CAND2O75155 1236 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 GCNT3O95395 438 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 EDN1P05305 212 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 RPLP2P05387 115 aaKnown RBP15.12■□□□□ 0.01
CD44-224ENST00000526669 IQCF3P0C7M6 154 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 CRYBB1P53674 252 aaPredicted RBP15.12■□□□□ 0.01
CD44-224ENST00000526669 SMTNP53814 917 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 ZC2HC1CQ53FD0 456 aaPredicted RBP15.12■□□□□ 0.01
CD44-224ENST00000526669 FAM26DQ5JW98 314 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 FBXO47Q5MNV8 452 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 CDCA2Q69YH5 1023 aaPredicted RBP15.12■□□□□ 0.01
CD44-224ENST00000526669 TAS1R3Q7RTX0 852 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 DEFB128Q7Z7B8 93 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 FAM228AQ86W67 206 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 ELOA2Q8IYF1 753 aaPredicted RBP15.12■□□□□ 0.01
CD44-224ENST00000526669 SMYD4Q8IYR2 804 aaPredicted RBP15.12■□□□□ 0.01
CD44-224ENST00000526669 SPIRE2Q8WWL2 714 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 INO80BQ9C086 356 aaPredicted RBP15.12■□□□□ 0.01
CD44-224ENST00000526669 C17orf75Q9HAS0 396 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 KIAA1468Q9P260 1216 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 SEL1LQ9UBV2 794 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 USP20Q9Y2K6 914 aa15.12■□□□□ 0.01
CD44-224ENST00000526669 NOC2LQ9Y3T9 749 aaKnown RBP15.12■□□□□ 0.01
CD44-224ENST00000526669 TNRC18O15417 2968 aaPredicted RBP15.11■□□□□ 0.01
CD44-224ENST00000526669 DENND3A2RUS2 1198 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 PRPF6O94906 941 aaKnown RBP15.11■□□□□ 0.01
CD44-224ENST00000526669 TIMP1P01033 207 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 PRKCBP05771 671 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 DARSP14868 501 aaKnown RBP15.11■□□□□ 0.01
CD44-224ENST00000526669 CD52P31358 61 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 MBTD1Q05BQ5 628 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 EHHADHQ08426 723 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 STK4Q13043 487 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 LPIN1Q14693 890 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 HAUS6Q7Z4H7 955 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 KIAA0895Q8NCT3 520 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 TMEM161BQ8NDZ6 487 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 C2orf40Q9H1Z8 148 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 AGO3Q9H9G7 860 aaKnown RBP15.11■□□□□ 0.01
CD44-224ENST00000526669 ARHGAP28Q9P2N2 729 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 RALGAPA2Q2PPJ7 1873 aa15.11■□□□□ 0.01
CD44-224ENST00000526669 TTC3P53804 2025 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 NBNO60934 754 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 RPS6KA5O75582 802 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 RHOBTB3O94955 611 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 MAPTP10636 758 aaKnown RBP15.1■□□□□ 0.01
CD44-224ENST00000526669 EIF4BP23588 611 aaKnown RBP15.1■□□□□ 0.01
CD44-224ENST00000526669 SARSP49591 514 aaKnown RBP15.1■□□□□ 0.01
CD44-224ENST00000526669 CDC42EP1Q00587 391 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 KCNB1Q14721 858 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 GPNMBQ14956 572 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 SKOR2Q2VWA4 1001 aaPredicted RBP15.1■□□□□ 0.01
CD44-224ENST00000526669 CATSPER4Q7RTX7 472 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 SRGAP1Q7Z6B7 1085 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 SPATA20Q8TB22 786 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 BADQ92934 168 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 SYAP1Q96A49 352 aaPredicted RBP15.1■□□□□ 0.01
CD44-224ENST00000526669 CPB2Q96IY4 423 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 CCDC113Q9H0I3 377 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 IKZF4Q9H2S9 585 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 OLFML3Q9NRN5 406 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 MAPK8IP1Q9UQF2 711 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 PHLPP2Q6ZVD8 1323 aa15.1■□□□□ 0.01
CD44-224ENST00000526669 FNDC1Q4ZHG4 1894 aaPredicted RBP15.1■□□□□ 0.01
CD44-224ENST00000526669 TTLL13PA6NNM8 815 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 K7ERI5 159 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 B4GALT5O43286 388 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 IBSPP21815 317 aaPredicted RBP15.09■□□□□ 0.01
CD44-224ENST00000526669 KCNA1Q09470 495 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 NFX1Q12986 1120 aaKnown RBP15.09■□□□□ 0.01
CD44-224ENST00000526669 PAK2Q13177 524 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 TMEM132AQ24JP5 1023 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 TCTN1Q2MV58 587 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 TSHZ1Q6ZSZ6 1077 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 ZNF720Q7Z2F6 126 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 CDR2LQ86X02 465 aaPredicted RBP15.09■□□□□ 0.01
CD44-224ENST00000526669 IFNLR1Q8IU57 520 aaPredicted RBP15.09■□□□□ 0.01
CD44-224ENST00000526669 NELFCDQ8IXH7 590 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 GSDMAQ96QA5 445 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 RMND1Q9NWS8 449 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 ST3GAL5Q9UNP4 418 aa15.09■□□□□ 0.01
CD44-224ENST00000526669 PPP1R37O75864 691 aa15.08■□□□□ 0
CD44-224ENST00000526669 ERLIN2O94905 339 aa15.08■□□□□ 0
CD44-224ENST00000526669 ACRP10323 421 aa15.08■□□□□ 0
CD44-224ENST00000526669 CSF2RAP15509 400 aa15.08■□□□□ 0
CD44-224ENST00000526669 SFPQP23246 707 aaKnown RBP eCLIP15.08■□□□□ 0
CD44-224ENST00000526669 GTF2BQ00403 316 aa15.08■□□□□ 0
CD44-224ENST00000526669 POU5F1BQ06416 359 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms