RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 NTPCRQ9BSD7 190 aaKnown RBP14.29□□□□□ -0.12
SMPD1-202ENST00000526280 TSPYL2Q9H2G4 693 aaPredicted RBP14.29□□□□□ -0.12
SMPD1-202ENST00000526280 TNMDQ9H2S6 317 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 KCNG1Q9UIX4 513 aa14.29□□□□□ -0.12
SMPD1-202ENST00000526280 LAMA3Q16787 3333 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 MYH11P35749 1972 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 GOLGA6L4A6NEF3 574 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 INO80B-WBP1J3KQ70 363 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 KRT18P05783 430 aaKnown RBP14.28□□□□□ -0.12
SMPD1-202ENST00000526280 ATP2A2P16615 1042 aaKnown RBP14.28□□□□□ -0.12
SMPD1-202ENST00000526280 ZNF131P52739 623 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 DEFB103AP81534 67 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 DMP1Q13316 513 aaPredicted RBP14.28□□□□□ -0.12
SMPD1-202ENST00000526280 LRIT3Q3SXY7 679 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 TPRNQ4KMQ1 711 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 CLEC17AQ6ZS10 378 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 DYMQ7RTS9 669 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 CATSPER4Q7RTX7 472 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 ZBTB8OSQ8IWT0 167 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 SPIRE2Q8WWL2 714 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 DNAJC19Q96DA6 116 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 SLC9A7Q96T83 725 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 ADAM2Q99965 735 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 KIFC3Q9BVG8 833 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 C2orf40Q9H1Z8 148 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 GOLPH3LQ9H4A5 285 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 MAGEF1Q9HAY2 307 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 CHST12Q9NRB3 414 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 RGS18Q9NS28 235 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 LARSQ9P2J5 1176 aaKnown RBP14.28□□□□□ -0.12
SMPD1-202ENST00000526280 USP25Q9UHP3 1055 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 ADGRA3Q8IWK6 1321 aa14.28□□□□□ -0.12
SMPD1-202ENST00000526280 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.27□□□□□ -0.12
SMPD1-202ENST00000526280 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.27□□□□□ -0.12
SMPD1-202ENST00000526280 DENND3A2RUS2 1198 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 CCDC169A6NNP5 214 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 ACTN4O43707 911 aaKnown RBP14.27□□□□□ -0.12
SMPD1-202ENST00000526280 FAM13AO94988 1023 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 AMHP03971 560 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 SLFN14P0C7P3 912 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 ZSCAN20P17040 1043 aaPredicted RBP14.27□□□□□ -0.12
SMPD1-202ENST00000526280 HOXA11P31270 313 aaPredicted RBP14.27□□□□□ -0.12
SMPD1-202ENST00000526280 SYKP43405 635 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 EFNA5P52803 228 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 AMPD3Q01432 767 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 AMHR2Q16671 573 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 LONRF3Q496Y0 759 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 FAM109BQ6ICB4 259 aaPredicted RBP14.27□□□□□ -0.12
SMPD1-202ENST00000526280 TMEM87AQ8NBN3 555 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 STAMQ92783 540 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 LRRC27Q9C0I9 530 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 CCDC113Q9H0I3 377 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 FZD8Q9H461 694 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 PARVGQ9HBI0 331 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 KMT5AQ9NQR1 393 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 AGPAT5Q9NUQ2 364 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 PRMT7Q9NVM4 692 aaPredicted RBP14.27□□□□□ -0.12
SMPD1-202ENST00000526280 ARHGAP28Q9P2N2 729 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 SERTAD1Q9UHV2 236 aa14.27□□□□□ -0.12
SMPD1-202ENST00000526280 TTC3P53804 2025 aa14.27□□□□□ -0.13
SMPD1-202ENST00000526280 GRXCR1A8MXD5 290 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 C9IYK1 514 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 TSPAN1O60635 241 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 TBCAO75347 108 aaKnown RBP14.26□□□□□ -0.13
SMPD1-202ENST00000526280 ERLIN2O94905 339 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 AXLP30530 894 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 SMTNP53814 917 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 FAM189BP81408 668 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 MAPK6Q16659 721 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 FAM187BQ17R55 369 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 CNNM4Q6P4Q7 775 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 PPP4R3CPQ6ZMV5 832 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 SLC24A5Q71RS6 500 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 HERC6Q8IVU3 1022 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 CEP57L1Q8IYX8 460 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 MYOCDQ8IZQ8 938 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 CRIPAKQ8N1N5 446 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 MYCT1Q8N699 235 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 TOP1MTQ969P6 601 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 PRIMPOLQ96LW4 560 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 C7orf25Q9BPX7 421 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 TRAIPQ9BWF2 469 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 TRIM9Q9C026 710 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 TMEM134Q9H6X4 195 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 C1orf112Q9NSG2 853 aa14.26□□□□□ -0.13
SMPD1-202ENST00000526280 PIN4Q9Y237 131 aaKnown RBP14.26□□□□□ -0.13
SMPD1-202ENST00000526280 K7ERI5 159 aa14.25□□□□□ -0.13
SMPD1-202ENST00000526280 SOX1O00570 391 aaPredicted RBP14.25□□□□□ -0.13
SMPD1-202ENST00000526280 ACKR2O00590 384 aa14.25□□□□□ -0.13
SMPD1-202ENST00000526280 SLC16A4O15374 487 aa14.25□□□□□ -0.13
SMPD1-202ENST00000526280 ZNF202O95125 648 aa14.25□□□□□ -0.13
SMPD1-202ENST00000526280 SARSP49591 514 aaKnown RBP14.25□□□□□ -0.13
SMPD1-202ENST00000526280 NCKAP1LP55160 1127 aa14.25□□□□□ -0.13
SMPD1-202ENST00000526280 SMAD3P84022 425 aaKnown RBP14.25□□□□□ -0.13
SMPD1-202ENST00000526280 NCBP1Q09161 790 aaKnown RBP14.25□□□□□ -0.13
SMPD1-202ENST00000526280 TMCO2Q7Z6W1 182 aaPredicted RBP14.25□□□□□ -0.13
SMPD1-202ENST00000526280 FMR1NBQ8N0W7 255 aaPredicted RBP14.25□□□□□ -0.13
SMPD1-202ENST00000526280 TMEM161BQ8NDZ6 487 aa14.25□□□□□ -0.13
SMPD1-202ENST00000526280 KCNN1Q92952 543 aa14.25□□□□□ -0.13
SMPD1-202ENST00000526280 PAGE5Q96GU1 130 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms