RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 BCL6BQ8N143 479 aaPredicted RBP6.07□□□□□ -1.44
USP47-206ENST00000525367 OR5AN1Q8NGI8 311 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 CALML6Q8TD86 181 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 TTC17Q96AE7 1141 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 CLIP3Q96DZ5 547 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 TMEM209Q96SK2 561 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 FDXACB1Q9BRP7 624 aaPredicted RBP6.07□□□□□ -1.44
USP47-206ENST00000525367 KRTAP17-1Q9BYP8 105 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 PPCSQ9HAB8 311 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 IFT122Q9HBG6 1241 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 NGRNQ9NPE2 291 aaKnown RBP6.07□□□□□ -1.44
USP47-206ENST00000525367 TAGLN3Q9UI15 199 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 ANAPC4Q9UJX5 808 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 CDY2AQ9Y6F7 541 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 NUMBLQ9Y6R0 609 aa6.07□□□□□ -1.44
USP47-206ENST00000525367 A0A0A6YYK5 440 aaPredicted RBP6.06□□□□□ -1.44
USP47-206ENST00000525367 ANO9A1A5B4 782 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 N4BP3O15049 544 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 COL6A1P12109 1028 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 PHKG2P15735 406 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 JUNBP17275 347 aaPredicted RBP6.06□□□□□ -1.44
USP47-206ENST00000525367 PFKLP17858 780 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 VCAM1P19320 739 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 LPOP22079 712 aaPredicted RBP6.06□□□□□ -1.44
USP47-206ENST00000525367 CYP2C19P33261 490 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 NEK3P51956 506 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 KIF23Q02241 960 aaPredicted RBP6.06□□□□□ -1.44
USP47-206ENST00000525367 INO80DQ53TQ3 878 aaPredicted RBP6.06□□□□□ -1.44
USP47-206ENST00000525367 WDR78Q5VTH9 848 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 CLEC4GQ6UXB4 293 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 ENAHQ8N8S7 591 aaPredicted RBP6.06□□□□□ -1.44
USP47-206ENST00000525367 ZCCHC14Q8WYQ9 949 aaKnown RBP6.06□□□□□ -1.44
USP47-206ENST00000525367 RPGRQ92834 1020 aaKnown RBP6.06□□□□□ -1.44
USP47-206ENST00000525367 ZBTB8AQ96BR9 441 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 RAX2Q96IS3 184 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 SENP7Q9BQF6 1050 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 NOL10Q9BSC4 688 aaKnown RBP6.06□□□□□ -1.44
USP47-206ENST00000525367 SOX7Q9BT81 388 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 FTSJ1Q9UET6 329 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 PCDHB6Q9Y5E3 794 aa6.06□□□□□ -1.44
USP47-206ENST00000525367 A0A0A6YYJ9 748 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 TBX3O15119 743 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 MLLT6P55198 1093 aaPredicted RBP6.05□□□□□ -1.44
USP47-206ENST00000525367 BCAR1P56945 870 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 GTF2H3Q13889 308 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 SAFBQ15424 915 aaKnown RBP eCLIP6.05□□□□□ -1.44
USP47-206ENST00000525367 ARHGAP29Q52LW3 1261 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 FBLN7Q53RD9 439 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 RRP12Q5JTH9 1297 aaKnown RBP6.05□□□□□ -1.44
USP47-206ENST00000525367 MBNL2Q5VZF2 373 aaKnown RBP6.05□□□□□ -1.44
USP47-206ENST00000525367 OR14C36Q8NHC7 312 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 GAB3Q8WWW8 586 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 TIFAQ96CG3 184 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 CLIC6Q96NY7 704 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 ELAC2Q9BQ52 826 aaKnown RBP6.05□□□□□ -1.44
USP47-206ENST00000525367 ACE2Q9BYF1 805 aaPredicted RBP6.05□□□□□ -1.44
USP47-206ENST00000525367 GTPBP4Q9BZE4 634 aaKnown RBP6.05□□□□□ -1.44
USP47-206ENST00000525367 EPB41L4AQ9HCS5 686 aaPredicted RBP6.05□□□□□ -1.44
USP47-206ENST00000525367 DDX20Q9UHI6 824 aaKnown RBP6.05□□□□□ -1.44
USP47-206ENST00000525367 PUF60Q9UHX1 559 aaKnown RBP6.05□□□□□ -1.44
USP47-206ENST00000525367 DNAI1Q9UI46 699 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 CDC42EP3Q9UKI2 254 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 DAAM1Q9Y4D1 1078 aa6.05□□□□□ -1.44
USP47-206ENST00000525367 TCEA3O75764 348 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 HTR3AP46098 478 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 STAT5BP51692 787 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 DLG4P78352 724 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 SPIDRQ14159 915 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 GBX1Q14549 363 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 SSPNQ14714 243 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 TMEM95Q3KNT9 176 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 UAP1L1Q3KQV9 507 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 WDR72Q3MJ13 1102 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 COBLL1Q53SF7 1204 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 MORC1Q86VD1 984 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 NME8Q8N427 588 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 LINC00482Q8N8I6 264 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 CDYL2Q8N8U2 506 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 KYQ8NBH2 561 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 MYRIPQ8NFW9 859 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 STRBPQ96SI9 672 aaKnown RBP6.04□□□□□ -1.44
USP47-206ENST00000525367 WNT8AQ9H1J5 351 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 SLC12A5Q9H2X9 1139 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 CASS4Q9NQ75 786 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 MAN1C1Q9NR34 630 aa6.04□□□□□ -1.44
USP47-206ENST00000525367 KRTAP9-7A8MTY7 169 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 ETV2O00321 342 aaPredicted RBP6.03□□□□□ -1.44
USP47-206ENST00000525367 AP1G1O43747 822 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 SEMA7AO75326 666 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 KNG1P01042 644 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 EDNRBP24530 442 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 SLC5A3P53794 718 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 LMOD3Q0VAK6 560 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 NFATC3Q12968 1075 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 ADRM1Q16186 407 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 IFIT1BQ5T764 474 aaKnown RBP6.03□□□□□ -1.44
USP47-206ENST00000525367 ANO1Q5XXA6 986 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 B3GNT9Q6UX72 402 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 SPOCD1Q6ZMY3 1216 aa6.03□□□□□ -1.44
USP47-206ENST00000525367 OTOP2Q7RTS6 562 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms