RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 KIAA1841Q6NSI8 718 aa19.23■□□□□ 0.67
TSKU-202ENST00000525167 ANO5Q75V66 913 aa19.23■□□□□ 0.67
TSKU-202ENST00000525167 KRT25Q7Z3Z0 450 aa19.23■□□□□ 0.67
TSKU-202ENST00000525167 VPS52Q8N1B4 723 aa19.23■□□□□ 0.67
TSKU-202ENST00000525167 TMEM87AQ8NBN3 555 aa19.23■□□□□ 0.67
TSKU-202ENST00000525167 PGBD4Q96DM1 585 aa19.23■□□□□ 0.67
TSKU-202ENST00000525167 IGSF21Q96ID5 467 aa19.23■□□□□ 0.67
TSKU-202ENST00000525167 POMKQ9H5K3 350 aa19.23■□□□□ 0.67
TSKU-202ENST00000525167 TSHZ2Q9NRE2 1034 aa19.23■□□□□ 0.67
TSKU-202ENST00000525167 TBC1D13Q9NVG8 400 aa19.23■□□□□ 0.67
TSKU-202ENST00000525167 DDX25Q9UHL0 483 aaKnown RBP19.23■□□□□ 0.67
TSKU-202ENST00000525167 CYP46A1Q9Y6A2 500 aa19.23■□□□□ 0.67
TSKU-202ENST00000525167 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.22■□□□□ 0.67
TSKU-202ENST00000525167 TMEM150BA6NC51 233 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 NT5C1B-RDH14C9J2C7 533 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 QARSP47897 775 aaKnown RBP19.22■□□□□ 0.67
TSKU-202ENST00000525167 PPP2R5CQ13362 524 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 CATSPER4Q7RTX7 472 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 PPFIBP1Q86W92 1011 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 KREMEN2Q8NCW0 462 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 SLC7A3Q8WY07 619 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 FAM20AQ96MK3 541 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 TM6SF1Q9BZW5 370 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 CYP26B1Q9NR63 512 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 AGPAT5Q9NUQ2 364 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 USTQ9Y2C2 406 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 ZDBF2Q9HCK1 2354 aa19.22■□□□□ 0.67
TSKU-202ENST00000525167 C2CD4DB7Z1M9 353 aa19.21■□□□□ 0.67
TSKU-202ENST00000525167 OFD1O75665 1012 aa19.21■□□□□ 0.67
TSKU-202ENST00000525167 GALTP07902 379 aa19.21■□□□□ 0.67
TSKU-202ENST00000525167 GCFC2P16383 781 aaKnown RBP19.21■□□□□ 0.67
TSKU-202ENST00000525167 CA8P35219 290 aa19.21■□□□□ 0.67
TSKU-202ENST00000525167 VCPP55072 806 aaKnown RBP19.21■□□□□ 0.67
TSKU-202ENST00000525167 RNASELQ05823 741 aaKnown RBP19.21■□□□□ 0.67
TSKU-202ENST00000525167 ZDHHC14Q8IZN3 488 aa19.21■□□□□ 0.67
TSKU-202ENST00000525167 PLCD3Q8N3E9 789 aa19.21■□□□□ 0.67
TSKU-202ENST00000525167 NLRP4Q96MN2 994 aa19.21■□□□□ 0.67
TSKU-202ENST00000525167 NRDE2Q9H7Z3 1164 aa19.21■□□□□ 0.67
TSKU-202ENST00000525167 IFT122Q9HBG6 1241 aa19.21■□□□□ 0.67
TSKU-202ENST00000525167 COL4A3BPQ9Y5P4 624 aa19.21■□□□□ 0.67
TSKU-202ENST00000525167 CNTNAP2Q9UHC6 1331 aa19.21■□□□□ 0.67
TSKU-202ENST00000525167 GAS2O43903 313 aaKnown RBP19.2■□□□□ 0.66
TSKU-202ENST00000525167 SP100P23497 879 aaPredicted RBP19.2■□□□□ 0.66
TSKU-202ENST00000525167 RFC5P40937 340 aa19.2■□□□□ 0.66
TSKU-202ENST00000525167 ATAT1Q5SQI0 421 aa19.2■□□□□ 0.66
TSKU-202ENST00000525167 PPP4R3AQ6IN85 833 aa19.2■□□□□ 0.66
TSKU-202ENST00000525167 SRGAP1Q7Z6B7 1085 aa19.2■□□□□ 0.66
TSKU-202ENST00000525167 TMEM173Q86WV6 379 aaPredicted RBP19.2■□□□□ 0.66
TSKU-202ENST00000525167 TDRD5Q8NAT2 981 aaKnown RBP19.2■□□□□ 0.66
TSKU-202ENST00000525167 URGCPQ8TCY9 931 aa19.2■□□□□ 0.66
TSKU-202ENST00000525167 SLC22A17Q8WUG5 538 aa19.2■□□□□ 0.66
TSKU-202ENST00000525167 LPPQ93052 612 aa19.2■□□□□ 0.66
TSKU-202ENST00000525167 PHOX2BQ99453 314 aa19.2■□□□□ 0.66
TSKU-202ENST00000525167 NAP1L4Q99733 375 aaKnown RBP19.2■□□□□ 0.66
TSKU-202ENST00000525167 SH2D3AQ9BRG2 576 aa19.2■□□□□ 0.66
TSKU-202ENST00000525167 KCNMB3Q9NPA1 279 aa19.2■□□□□ 0.66
TSKU-202ENST00000525167 KANSL3Q9P2N6 904 aa19.2■□□□□ 0.66
TSKU-202ENST00000525167 VAV3Q9UKW4 847 aa19.2■□□□□ 0.66
TSKU-202ENST00000525167 TBX3O15119 743 aa19.19■□□□□ 0.66
TSKU-202ENST00000525167 SLC37A4O43826 429 aa19.19■□□□□ 0.66
TSKU-202ENST00000525167 CDKL5O76039 1030 aa19.19■□□□□ 0.66
TSKU-202ENST00000525167 P4HBP07237 508 aaKnown RBP19.19■□□□□ 0.66
TSKU-202ENST00000525167 INF2Q27J81 1249 aa19.19■□□□□ 0.66
TSKU-202ENST00000525167 RARS2Q5T160 578 aaKnown RBP19.19■□□□□ 0.66
TSKU-202ENST00000525167 PLA2G4FQ68DD2 849 aa19.19■□□□□ 0.66
TSKU-202ENST00000525167 MRPL10Q7Z7H8 261 aaKnown RBP19.19■□□□□ 0.66
TSKU-202ENST00000525167 KSR1Q8IVT5 923 aa19.19■□□□□ 0.66
TSKU-202ENST00000525167 PSPC1Q8WXF1 523 aaKnown RBP19.19■□□□□ 0.66
TSKU-202ENST00000525167 DHX33Q9H6R0 707 aaKnown RBP19.19■□□□□ 0.66
TSKU-202ENST00000525167 CDH22Q9UJ99 828 aa19.19■□□□□ 0.66
TSKU-202ENST00000525167 INPP5FQ9Y2H2 1132 aa19.19■□□□□ 0.66
TSKU-202ENST00000525167 PCDHB2Q9Y5E7 798 aa19.19■□□□□ 0.66
TSKU-202ENST00000525167 CCDC194A0A1B0GVG4 234 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 EML1O00423 815 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 ST18O60284 1047 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 BRD1O95696 1058 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 XBP1P17861 261 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 SLC11A1P49279 550 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 PCBP1Q15365 356 aaKnown RBP eCLIP19.18■□□□□ 0.66
TSKU-202ENST00000525167 PTPN14Q15678 1187 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 LETM2Q2VYF4 491 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 NEK8Q86SG6 692 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 CABP7Q86V35 215 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 C4orf19Q8IY42 314 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 BCL7CQ8WUZ0 217 aaPredicted RBP19.18■□□□□ 0.66
TSKU-202ENST00000525167 CEP170P1Q96L14 293 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 TMEM175Q9BSA9 504 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 PHF20Q9BVI0 1012 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 EMILIN2Q9BXX0 1053 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 SFXN1Q9H9B4 322 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 DNAJB4Q9UDY4 337 aa19.18■□□□□ 0.66
TSKU-202ENST00000525167 DBR1Q9UK59 544 aaKnown RBP19.18■□□□□ 0.66
TSKU-202ENST00000525167 USP34Q70CQ2 3546 aa19.17■□□□□ 0.66
TSKU-202ENST00000525167 MEIS3P2A8K0S8 358 aa19.17■□□□□ 0.66
TSKU-202ENST00000525167 ASAP2O43150 1006 aa19.17■□□□□ 0.66
TSKU-202ENST00000525167 EPCAMP16422 314 aa19.17■□□□□ 0.66
TSKU-202ENST00000525167 AGMOQ6ZNB7 445 aa19.17■□□□□ 0.66
TSKU-202ENST00000525167 CNNM3Q8NE01 707 aa19.17■□□□□ 0.66
TSKU-202ENST00000525167 TCP11Q8WWU5 503 aa19.17■□□□□ 0.66
TSKU-202ENST00000525167 PRPF31Q8WWY3 499 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms