RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ZNF202O95125 648 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 NPTXRO95502 500 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 PRKCBP05771 671 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 MYBP10242 640 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 PLS3P13797 630 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 ATP2A2P16615 1042 aaKnown RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 ARF4P18085 180 aaPredicted RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 EIF4BP23588 611 aaKnown RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 GUCY2CP25092 1073 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 RFC2P35250 354 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 NAMPTP43490 491 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 PHKA2P46019 1235 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 KCNJ6P48051 423 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 CASP5P51878 434 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 PTENP60484 403 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 OSTNP61366 133 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 ASIC1P78348 528 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 KCNA1Q09470 495 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 COASYQ13057 564 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 PNOCQ13519 176 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 TFDP1Q14186 410 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 MXD4Q14582 209 aaPredicted RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 CAMK4Q16566 473 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 AMHR2Q16671 573 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 HERC4Q5GLZ8 1057 aaPredicted RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 TWF2Q6IBS0 349 aaKnown RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 PSRC1Q6PGN9 363 aaPredicted RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 KRBA2Q6ZNG9 492 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 TAS1R3Q7RTX0 852 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 ZBTB33Q86T24 672 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 ZNF410Q86VK4 478 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 NELFCDQ8IXH7 590 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 CEP57L1Q8IYX8 460 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 FMR1NBQ8N0W7 255 aaPredicted RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 TMEM130Q8N3G9 435 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 IQUBQ8NA54 791 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 CNNM3Q8NE01 707 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 NOC3LQ8WTT2 800 aaKnown RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 HERVK_113Q902F9 699 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 KIFAP3Q92845 792 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 PAGE5Q96GU1 130 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 ZBTB45Q96K62 511 aaPredicted RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 IFT74Q96LB3 600 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 DRC1Q96MC2 740 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 ZBED2Q9BTP6 218 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 TARS2Q9BW92 718 aaKnown RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 CXCL16Q9H2A7 254 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 RNF39Q9H2S5 420 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 NKX2-4Q9H2Z4 354 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 PRO3102Q9H379 93 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 SLC39A2Q9NP94 309 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 PANK4Q9NVE7 773 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 KLK14Q9P0G3 267 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 STK17AQ9UEE5 414 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 MTUS1Q9ULD2 1270 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 YBX2Q9Y2T7 364 aaKnown RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 SLC4A7Q9Y6M7 1214 aa5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 MORC2Q9Y6X9 1032 aaPredicted RBP5.08□□□□□ -1.6
CHMP4A-202ENST00000524955 LTBP2Q14767 1821 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 ABHD14A-ACY1A0A1B0GW23 586 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 A0A1W2PQ27 194 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 A0A1W2PQ64 194 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 A0A1W2PQD8 194 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 ANKRD63C9JTQ0 380 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 K7ERI5 159 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 RFXAPO00287 272 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 BIN1O00499 593 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 ASAP2O43150 1006 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 TLL1O43897 1013 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 GAS2O43903 313 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 TRAK2O60296 914 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 PRPF6O94906 941 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 GCNT3O95395 438 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 AMHP03971 560 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 SLFN14P0C7P3 912 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 MAPTP10636 758 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 ACTN1P12814 892 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 ZSCAN20P17040 1043 aaPredicted RBP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 SFPQP23246 707 aaKnown RBP eCLIP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 AKAP5P24588 427 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 HOXA11P31270 313 aaPredicted RBP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 BMP8BP34820 402 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 PBX3P40426 434 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 MATR3P43243 847 aaKnown RBP eCLIP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 AFF1P51825 1210 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 DMP1Q13316 513 aaPredicted RBP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 PRPF4BQ13523 1007 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 SNW1Q13573 536 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 DSC3Q14574 896 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 KMT5BQ4FZB7 885 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 HABP4Q5JVS0 413 aaKnown RBP5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 UBXN11Q5T124 520 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 NT5DC1Q5TFE4 455 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 RASIP1Q5U651 963 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 Q7L0L9 218 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 HAUS6Q7Z4H7 955 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 SRGAP1Q7Z6B7 1085 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 ECHDC2Q86YB7 292 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 HERC6Q8IVU3 1022 aa5.07□□□□□ -1.6
CHMP4A-202ENST00000524955 ZBTB8OSQ8IWT0 167 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms