RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ACRV1P26436 265 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 APEX1P27695 318 aaKnown RBP4.26□□□□□ -1.73
CSDE1-208ENST00000524652 PTH1RQ03431 593 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 HGFACQ04756 655 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 KLF10Q13118 480 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 SOGA3Q5TF21 947 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 FSTL4Q6MZW2 842 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 THAP3Q8WTV1 239 aaPredicted RBP4.26□□□□□ -1.73
CSDE1-208ENST00000524652 LPPQ93052 612 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 SCLYQ96I15 445 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 AURKAIP1Q9NWT8 199 aaPredicted RBP4.26□□□□□ -1.73
CSDE1-208ENST00000524652 PLA2G3Q9NZ20 509 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 CEP350Q5VT06 3117 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 PTPRTO14522 1441 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 SETD1AO15047 1707 aaKnown RBP4.26□□□□□ -1.73
CSDE1-208ENST00000524652 IQGAP1P46940 1657 aa4.26□□□□□ -1.73
CSDE1-208ENST00000524652 TCRBV16S1A1N1A0A5B0 115 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 PRAMEF22A3QJZ6 481 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 GOLGA6L22H0YM25 854 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 SLC26A4O43511 780 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 IRF9Q00978 393 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 ABHD18Q0P651 414 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 FOXL1Q12952 345 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 GRM7Q14831 915 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 TMEM177Q53S58 311 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 C2orf27AQ580R0 203 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 CATSPEREQ5SY80 951 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 OTOP1Q7RTM1 612 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 BRAPQ7Z569 592 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 ADGRE4PQ86SQ3 457 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 C1orf210Q8IVY1 113 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 ZNF808Q8N4W9 903 aaPredicted RBP4.25□□□□□ -1.73
CSDE1-208ENST00000524652 AMER2Q8N7J2 671 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 EXTL1Q92935 676 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 SRPK1Q96SB4 655 aaKnown RBP4.25□□□□□ -1.73
CSDE1-208ENST00000524652 MPHOSPH9Q99550 1183 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 DNAJC7Q99615 494 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 FOXB1Q99853 325 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 MENTQ9BUN1 341 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 BOCQ9BWV1 1114 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 ADGRB3O60242 1522 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 KANK1Q14678 1352 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 STRCP1A6NGW2 1772 aa4.25□□□□□ -1.73
CSDE1-208ENST00000524652 NRXN3Q9Y4C0 1643 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 NEURL4Q96JN8 1562 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 ZNF202O95125 648 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 MCM7P33993 719 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 MSX2P35548 267 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-208ENST00000524652 FNTBP49356 437 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 STAT5BP51692 787 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 HSPA2P54652 639 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 ALDH6A1Q02252 535 aaKnown RBP4.24□□□□□ -1.73
CSDE1-208ENST00000524652 HHEXQ03014 270 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 TMEM132BQ14DG7 1078 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 CC2D1AQ6P1N0 951 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-208ENST00000524652 ABHD17CQ6PCB6 329 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 RTN4RL1Q86UN2 441 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-208ENST00000524652 GPR135Q8IZ08 494 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 BCL6BQ8N143 479 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-208ENST00000524652 C2orf69Q8N8R5 385 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 IGSF22Q8N9C0 903 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 SHCBP1Q8NEM2 672 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 OR14K1Q8NGZ2 314 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 IL17DQ8TAD2 202 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 CACTINQ8WUQ7 758 aaKnown RBP4.24□□□□□ -1.73
CSDE1-208ENST00000524652 E2F7Q96AV8 911 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 CSRNP2Q9H175 543 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 ZNF703Q9H7S9 590 aaPredicted RBP4.24□□□□□ -1.73
CSDE1-208ENST00000524652 NCOA5Q9HCD5 579 aaKnown RBP4.24□□□□□ -1.73
CSDE1-208ENST00000524652 TRIM39Q9HCM9 518 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 TLR9Q9NR96 1032 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 FAM184BQ9ULE4 1060 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 NEXMIFQ5QGS0 1516 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 TNRQ92752 1358 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 ANKRD30BQ9BXX2 1392 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 A2ML1A8K2U0 1454 aa4.24□□□□□ -1.73
CSDE1-208ENST00000524652 B4E1Z4 1266 aa4.23□□□□□ -1.73
CSDE1-208ENST00000524652 PLSCR1O15162 318 aa4.23□□□□□ -1.73
CSDE1-208ENST00000524652 CYP27B1O15528 508 aa4.23□□□□□ -1.73
CSDE1-208ENST00000524652 NARSO43776 548 aaKnown RBP4.23□□□□□ -1.73
CSDE1-208ENST00000524652 ZBTB48P10074 688 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-208ENST00000524652 KCNA6P17658 529 aa4.23□□□□□ -1.73
CSDE1-208ENST00000524652 HIBADHP31937 336 aaKnown RBP4.23□□□□□ -1.73
CSDE1-208ENST00000524652 SESN2P58004 480 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-208ENST00000524652 PURAQ00577 322 aaKnown RBP4.23□□□□□ -1.73
CSDE1-208ENST00000524652 FHL2Q14192 279 aa4.23□□□□□ -1.73
CSDE1-208ENST00000524652 SF3A1Q15459 793 aaKnown RBP4.23□□□□□ -1.73
CSDE1-208ENST00000524652 ARHGAP44Q17R89 818 aa4.23□□□□□ -1.73
CSDE1-208ENST00000524652 LSM12Q3MHD2 195 aaKnown RBP4.23□□□□□ -1.73
CSDE1-208ENST00000524652 KLHDC10Q6PID8 442 aa4.23□□□□□ -1.73
CSDE1-208ENST00000524652 FGD2Q7Z6J4 655 aa4.23□□□□□ -1.73
CSDE1-208ENST00000524652 RABGGTAQ92696 567 aa4.23□□□□□ -1.73
CSDE1-208ENST00000524652 FOXRED1Q96CU9 486 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-208ENST00000524652 PLEKHG4BQ96PX9 1271 aa4.23□□□□□ -1.73
CSDE1-208ENST00000524652 ING1Q9UK53 422 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-208ENST00000524652 CTDP1Q9Y5B0 961 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-208ENST00000524652 PTCH2Q9Y6C5 1203 aa4.23□□□□□ -1.73
CSDE1-208ENST00000524652 NLRP1Q9C000 1473 aa4.23□□□□□ -1.73
CSDE1-208ENST00000524652 XIRP1Q702N8 1843 aaKnown RBP4.23□□□□□ -1.73
CSDE1-208ENST00000524652 SPATA31E1Q6ZUB1 1445 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms