RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 C7orf43Q8WVR3 580 aa9□□□□□ -0.97
CHD7-202ENST00000524602 CNKSR1Q969H4 720 aa9□□□□□ -0.97
CHD7-202ENST00000524602 CCT8L2Q96SF2 557 aa9□□□□□ -0.97
CHD7-202ENST00000524602 CNOT10Q9H9A5 744 aaKnown RBP9□□□□□ -0.97
CHD7-202ENST00000524602 SLC12A6Q9UHW9 1150 aa9□□□□□ -0.97
CHD7-202ENST00000524602 MRPL11Q9Y3B7 192 aaKnown RBP9□□□□□ -0.97
CHD7-202ENST00000524602 SYNGAP1Q96PV0 1343 aa9□□□□□ -0.97
CHD7-202ENST00000524602 MAPK13O15264 365 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 TTI1O43156 1089 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 DAPK3O43293 454 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 GGPS1O95749 300 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 PPARDQ03181 441 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 ODR4Q5SWX8 454 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 MMS22LQ6ZRQ5 1243 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 INTS8Q75QN2 995 aaKnown RBP8.99□□□□□ -0.97
CHD7-202ENST00000524602 CROCCP2Q86T23 111 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 C12orf56Q8IXR9 622 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 UBLCP1Q8WVY7 318 aaPredicted RBP8.99□□□□□ -0.97
CHD7-202ENST00000524602 MYCBPQ99417 103 aaPredicted RBP8.99□□□□□ -0.97
CHD7-202ENST00000524602 RIT2Q99578 217 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 TXLNGYQ9BZA5 131 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 NEUROG2Q9H2A3 272 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 RANBP17Q9H2T7 1088 aaKnown RBP8.99□□□□□ -0.97
CHD7-202ENST00000524602 TMEM206Q9H813 350 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 RASAL2Q9UJF2 1139 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 USP20Q9Y2K6 914 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 SAMM50Q9Y512 469 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 SFI1A8K8P3 1242 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 MYO1FO00160 1098 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 PMM2O15305 246 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 ITGA4P13612 1032 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 KRT13P13646 458 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 PPP2R2AP63151 447 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 CBWD6Q4V339 395 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 ZC2HC1CQ53FD0 456 aaPredicted RBP8.99□□□□□ -0.97
CHD7-202ENST00000524602 CBWD3Q5JTY5 395 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 CBWD5Q5RIA9 395 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 CC2D2BQ6DHV5 1058 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 B3GNT9Q6UX72 402 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 HOOK3Q86VS8 718 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 CHURC1Q8WUH1 139 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 FMO2Q99518 471 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 TEKT3Q9BXF9 490 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 DEFB129Q9H1M3 183 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 OSGEPQ9NPF4 335 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 GEMIN8Q9NWZ8 242 aaKnown RBP8.99□□□□□ -0.97
CHD7-202ENST00000524602 PSEN1P49768 467 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 LIG3P49916 1009 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 DR1Q01658 176 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 DUPD1Q68J44 220 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 DDX42Q86XP3 938 aaKnown RBP eCLIP8.99□□□□□ -0.97
CHD7-202ENST00000524602 UBL4BQ8N7F7 174 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 RUNDC3BQ96NL0 473 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 AGPAT1Q99943 283 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 ERP44Q9BS26 406 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 ZNF577Q9BSK1 485 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 FAM129AQ9BZQ8 928 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 PPP1R9AQ9ULJ8 1098 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 TMX2Q9Y320 296 aa8.99□□□□□ -0.97
CHD7-202ENST00000524602 GMNCA6NCL1 334 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 TRAPPC3O43617 180 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 EXOC3O60645 756 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 CFBP00751 764 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 NUDT17P0C025 328 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 CYP2J2P51589 502 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 MCCD1P59942 119 aaPredicted RBP8.98□□□□□ -0.97
CHD7-202ENST00000524602 DHX9Q08211 1270 aaKnown RBP8.98□□□□□ -0.97
CHD7-202ENST00000524602 LMO3Q8TAP4 145 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 RPS6KC1Q96S38 1066 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 PARP2Q9UGN5 583 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 A0A1W2PRG0 241 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 ARHGEF35A5YM69 484 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 E7EVH7 732 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 C21orf2O43822 256 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 MTA2O94776 668 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 HPDP32754 393 aaPredicted RBP8.98□□□□□ -0.97
CHD7-202ENST00000524602 COG2Q14746 738 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 DCAF12L1Q5VU92 463 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 FAM160B2Q86V87 743 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 SYCP3Q8IZU3 236 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 PRPF38AQ8NAV1 312 aaKnown RBP8.98□□□□□ -0.97
CHD7-202ENST00000524602 CENPTQ96BT3 561 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 CSRNP1Q96S65 589 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 TIPINQ9BVW5 301 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 UNC45AQ9H3U1 944 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 PSME4Q14997 1843 aa8.98□□□□□ -0.97
CHD7-202ENST00000524602 PODXLO00592 558 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 CLGNO14967 610 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 CHMP2AO43633 222 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 POLD1P28340 1107 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 CHRNA3P32297 505 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 ODF2Q5BJF6 829 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 NIPA1Q7RTP0 329 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 DNAAF5Q86Y56 855 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 SLC17A8Q8NDX2 589 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 ATP8B4Q8TF62 1192 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 P3H4Q92791 437 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 PSMD1Q99460 953 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 LXNQ9BS40 222 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 THAP2Q9H0W7 228 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms