RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 ZNF623O75123 536 aa13.25□□□□□ -0.29
CLN8-207ENST00000524258 HIP1RO75146 1068 aa13.25□□□□□ -0.29
CLN8-207ENST00000524258 SFPQP23246 707 aaKnown RBP eCLIP13.25□□□□□ -0.29
CLN8-207ENST00000524258 PHKA2P46019 1235 aa13.25□□□□□ -0.29
CLN8-207ENST00000524258 ERVK-21P61565 698 aa13.25□□□□□ -0.29
CLN8-207ENST00000524258 ADGRE1Q14246 886 aa13.25□□□□□ -0.29
CLN8-207ENST00000524258 BECN1Q14457 450 aa13.25□□□□□ -0.29
CLN8-207ENST00000524258 FOXD4L6Q3SYB3 417 aaPredicted RBP13.25□□□□□ -0.29
CLN8-207ENST00000524258 FAM102BQ5T8I3 360 aa13.25□□□□□ -0.29
CLN8-207ENST00000524258 SHC4Q6S5L8 630 aa13.25□□□□□ -0.29
CLN8-207ENST00000524258 FOXD4L3Q6VB84 417 aaPredicted RBP13.25□□□□□ -0.29
CLN8-207ENST00000524258 RAD54LQ92698 747 aa13.25□□□□□ -0.29
CLN8-207ENST00000524258 SCLT1Q96NL6 688 aa13.25□□□□□ -0.29
CLN8-207ENST00000524258 ZBED2Q9BTP6 218 aa13.25□□□□□ -0.29
CLN8-207ENST00000524258 NPHP3-ACAD11A0A0J9YXS1 232 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 DENND3A2RUS2 1198 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 LPXNO60711 386 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 NAMPTP43490 491 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 TFDP1Q14186 410 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 MCM6Q14566 821 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 STK38Q15208 465 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 PCBP1Q15365 356 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLN8-207ENST00000524258 ZRSR1Q15695 479 aaKnown RBP13.24□□□□□ -0.29
CLN8-207ENST00000524258 FAM187BQ17R55 369 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 PPP2R2DQ66LE6 453 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 TAS1R3Q7RTX0 852 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 CATSPER4Q7RTX7 472 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 MRPL10Q7Z7H8 261 aaKnown RBP13.24□□□□□ -0.29
CLN8-207ENST00000524258 KIFAP3Q92845 792 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 CLP1Q92989 425 aaKnown RBP13.24□□□□□ -0.29
CLN8-207ENST00000524258 CCDC43Q96MW1 224 aaKnown RBP13.24□□□□□ -0.29
CLN8-207ENST00000524258 NTPCRQ9BSD7 190 aaKnown RBP13.24□□□□□ -0.29
CLN8-207ENST00000524258 TMEM161AQ9NX61 479 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 PCDHA7Q9UN72 937 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 EYSQ5T1H1 3165 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 PRUNE2Q8WUY3 3088 aa13.24□□□□□ -0.29
CLN8-207ENST00000524258 MYH15Q9Y2K3 1946 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 MEIS3P2A8K0S8 358 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 RFXAPO00287 272 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 B4GALT5O43286 388 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 CUTAO60888 179 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 ZSCAN20P17040 1043 aaPredicted RBP13.23□□□□□ -0.29
CLN8-207ENST00000524258 ARF4P18085 180 aaPredicted RBP13.23□□□□□ -0.29
CLN8-207ENST00000524258 NPTX2P47972 431 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 ZNF131P52739 623 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 E2F4Q16254 413 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 CLLU1OSQ5K130 101 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 MYLIPQ8WY64 445 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 KCNN1Q92952 543 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 CALML4Q96GE6 196 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 CASD1Q96PB1 797 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 FIZ1Q96SL8 496 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 YME1L1Q96TA2 773 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 C17orf80Q9BSJ5 609 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 KIFC3Q9BVG8 833 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 TIPINQ9BVW5 301 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 PRDM12Q9H4Q4 367 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 KCND2Q9NZV8 630 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 ARHGAP28Q9P2N2 729 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 DAXXQ9UER7 740 aaPredicted RBP13.23□□□□□ -0.29
CLN8-207ENST00000524258 PIN4Q9Y237 131 aaKnown RBP13.23□□□□□ -0.29
CLN8-207ENST00000524258 REV3LO60673 3130 aa13.23□□□□□ -0.29
CLN8-207ENST00000524258 A0A1B0GUA9 196 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 LRRIQ4A6NIV6 560 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 SFI1A8K8P3 1242 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 INO80B-WBP1J3KQ70 363 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 EOMESO95936 686 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 STAG3L1P0CL83 205 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 FGFR1P11362 822 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 POU3F3P20264 500 aaPredicted RBP13.22□□□□□ -0.29
CLN8-207ENST00000524258 AXLP30530 894 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 GIT2Q14161 759 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 LRRC55Q6ZSA7 311 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 CMTR2Q8IYT2 770 aaKnown RBP13.22□□□□□ -0.29
CLN8-207ENST00000524258 SMG8Q8ND04 991 aaKnown RBP13.22□□□□□ -0.29
CLN8-207ENST00000524258 KCNG4Q8TDN1 519 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 LEO1Q8WVC0 666 aaPredicted RBP13.22□□□□□ -0.29
CLN8-207ENST00000524258 SPIRE2Q8WWL2 714 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 LARP4BQ92615 738 aaKnown RBP13.22□□□□□ -0.29
CLN8-207ENST00000524258 DNAJC19Q96DA6 116 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 CPB2Q96IY4 423 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 CDK5RAP3Q96JB5 506 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 TGS1Q96RS0 853 aaKnown RBP13.22□□□□□ -0.29
CLN8-207ENST00000524258 EIF2AQ9BY44 585 aaKnown RBP13.22□□□□□ -0.29
CLN8-207ENST00000524258 CERS4Q9HA82 394 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 FAM105AQ9NUU6 356 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 DACT1Q9NYF0 836 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 HCSTQ9UBK5 93 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 STK17AQ9UEE5 414 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 USP20Q9Y2K6 914 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 PCDHB7Q9Y5E2 793 aa13.22□□□□□ -0.29
CLN8-207ENST00000524258 MRPL42Q9Y6G3 142 aaKnown RBP13.22□□□□□ -0.29
CLN8-207ENST00000524258 C5orf67F2Z3F1 127 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 ACKR2O00590 384 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 PEX3P56589 373 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
CLN8-207ENST00000524258 RAD51AP2Q09MP3 1159 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 NT5DC1Q5TFE4 455 aa13.21□□□□□ -0.29
CLN8-207ENST00000524258 AGMOQ6ZNB7 445 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms