RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 FGFR4P22455 802 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 RAB27AP51159 221 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 KRT85P78386 507 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 DNM1Q05193 864 aaKnown RBP13.89□□□□□ -0.19
VEGFA-225ENST00000523950 MBTD1Q05BQ5 628 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 FAM117BQ6P1L5 589 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 PPP4R3CPQ6ZMV5 832 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 CCDC73Q6ZRK6 1079 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 TMCO2Q7Z6W1 182 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-225ENST00000523950 CMTR2Q8IYT2 770 aaKnown RBP13.89□□□□□ -0.19
VEGFA-225ENST00000523950 DEPTORQ8TB45 409 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 LARP4BQ92615 738 aaKnown RBP13.89□□□□□ -0.19
VEGFA-225ENST00000523950 RAD54LQ92698 747 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 ZNF689Q96CS4 500 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-225ENST00000523950 EPSTI1Q96J88 318 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 CLIC6Q96NY7 704 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 BLOC1S4Q9NUP1 217 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 PRMT7Q9NVM4 692 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-225ENST00000523950 MTMR10Q9NXD2 777 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 ODF2LQ9ULJ1 636 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 PIN4Q9Y237 131 aaKnown RBP13.89□□□□□ -0.19
VEGFA-225ENST00000523950 ZDHHC9Q9Y397 364 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 RWDD3Q9Y3V2 267 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 FNDC1Q4ZHG4 1894 aaPredicted RBP13.89□□□□□ -0.19
VEGFA-225ENST00000523950 NLRC5Q86WI3 1866 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 LINC01553A4QN01 128 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 HIP1RO75146 1068 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 CSDE1O75534 798 aaKnown RBP13.88□□□□□ -0.19
VEGFA-225ENST00000523950 EOMESO95936 686 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 SSBP05455 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
VEGFA-225ENST00000523950 DDIT3P35638 169 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 EFNA5P52803 228 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 TAP1Q03518 808 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 DMP1Q13316 513 aaPredicted RBP13.88□□□□□ -0.19
VEGFA-225ENST00000523950 FAM187BQ17R55 369 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 RRAGBQ5VZM2 374 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 TWF2Q6IBS0 349 aaKnown RBP13.88□□□□□ -0.19
VEGFA-225ENST00000523950 NOTUMQ6P988 496 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 Q7L0L9 218 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 ECHDC2Q86YB7 292 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 CNNM3Q8NE01 707 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 PLIN2Q99541 437 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 RUSC1Q9BVN2 902 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 MINDY3Q9H8M7 445 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 RCOR1Q9UKL0 485 aa13.88□□□□□ -0.19
VEGFA-225ENST00000523950 LCHNA4D1U4 455 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 TSPAN1O60635 241 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 ZNF623O75123 536 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 SCP2P22307 547 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 ERVK-21P61565 698 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 MAPK7Q13164 816 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 MAPK6Q16659 721 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 SPECC1Q5M775 1068 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 USP49Q70CQ1 688 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 DAW1Q8N136 415 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 FIBCD1Q8N539 461 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 BSNDQ8WZ55 320 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 PGBD4Q96DM1 585 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 TGS1Q96RS0 853 aaKnown RBP13.87□□□□□ -0.19
VEGFA-225ENST00000523950 FZD8Q9H461 694 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 FAM105AQ9NUU6 356 aa13.87□□□□□ -0.19
VEGFA-225ENST00000523950 LARSQ9P2J5 1176 aaKnown RBP13.87□□□□□ -0.19
VEGFA-225ENST00000523950 TCHHQ07283 1943 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 H0YCG3 227 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 PLS3P13797 630 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 HOXA11P31270 313 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-225ENST00000523950 STAT6P42226 847 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 ME1P48163 572 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 PEX3P56589 373 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 BTG3Q14201 252 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-225ENST00000523950 AMHR2Q16671 573 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 FOXD4L6Q3SYB3 417 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-225ENST00000523950 FOXD4L3Q6VB84 417 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-225ENST00000523950 ZNF598Q86UK7 904 aaKnown RBP13.86□□□□□ -0.19
VEGFA-225ENST00000523950 GPBP1Q86WP2 473 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 SPIRE2Q8WWL2 714 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 KCNN1Q92952 543 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 FAM161BQ96MY7 647 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 GUCD1Q96NT3 240 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 PYM1Q9BRP8 204 aaKnown RBP13.86□□□□□ -0.19
VEGFA-225ENST00000523950 NTPCRQ9BSD7 190 aaKnown RBP13.86□□□□□ -0.19
VEGFA-225ENST00000523950 SCAND2PQ9GZW5 306 aaPredicted RBP13.86□□□□□ -0.19
VEGFA-225ENST00000523950 TMEM117Q9H0C3 514 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 CCDC113Q9H0I3 377 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 CUEDC2Q9H467 287 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 TMEM134Q9H6X4 195 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 CNTNAP2Q9UHC6 1331 aa13.86□□□□□ -0.19
VEGFA-225ENST00000523950 ACKR2O00590 384 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 ARF4P18085 180 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-225ENST00000523950 ABCD1P33897 745 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 NPTX2P47972 431 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 SMTNP53814 917 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 MCM6Q14566 821 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 GRIN2CQ14957 1233 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 ARSHQ5FYA8 562 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 AXDND1Q5T1B0 1012 aaPredicted RBP13.85□□□□□ -0.19
VEGFA-225ENST00000523950 SV2BQ7L1I2 683 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 HACE1Q8IYU2 909 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 ABI1Q8IZP0 508 aa13.85□□□□□ -0.19
VEGFA-225ENST00000523950 LRRC15Q8TF66 581 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms