RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 POLGP54098 1239 aaPredicted RBP13.14□□□□□ -0.31
SDCBP-211ENST00000523441 PRKCEQ02156 737 aa13.14□□□□□ -0.31
SDCBP-211ENST00000523441 TBC1D8BQ0IIM8 1120 aa13.14□□□□□ -0.31
SDCBP-211ENST00000523441 MTERF2Q49AM1 385 aa13.14□□□□□ -0.31
SDCBP-211ENST00000523441 PRR16Q569H4 304 aa13.14□□□□□ -0.31
SDCBP-211ENST00000523441 SYNE3Q6ZMZ3 975 aa13.14□□□□□ -0.31
SDCBP-211ENST00000523441 SLC44A3Q8N4M1 653 aa13.14□□□□□ -0.31
SDCBP-211ENST00000523441 FAM193BQ96PV7 902 aaPredicted RBP13.14□□□□□ -0.31
SDCBP-211ENST00000523441 SEMA4AQ9H3S1 761 aa13.14□□□□□ -0.31
SDCBP-211ENST00000523441 WNT16Q9UBV4 365 aa13.14□□□□□ -0.31
SDCBP-211ENST00000523441 PRG3Q9Y2Y8 225 aaPredicted RBP13.14□□□□□ -0.31
SDCBP-211ENST00000523441 PCDHA10Q9Y5I2 948 aa13.14□□□□□ -0.31
SDCBP-211ENST00000523441 CLUHO75153 1309 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 SPTBN2O15020 2390 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 A0A087WZ62 844 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 ADAMTS3O15072 1205 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 INPPL1O15357 1258 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 DDHD2O94830 711 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 POMCP01189 267 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 OATP04181 439 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 NONOQ15233 471 aaKnown RBP eCLIP13.13□□□□□ -0.31
SDCBP-211ENST00000523441 UGCGQ16739 394 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 PALB2Q86YC2 1186 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 KSR1Q8IVT5 923 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 C1orf210Q8IVY1 113 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 TMTC2Q8N394 836 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 SMG7Q92540 1137 aaKnown RBP13.13□□□□□ -0.31
SDCBP-211ENST00000523441 GJA10Q969M2 543 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 TMEM87BQ96K49 555 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 TCEANC2Q96MN5 208 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 FDXACB1Q9BRP7 624 aaPredicted RBP13.13□□□□□ -0.31
SDCBP-211ENST00000523441 GCOM2Q9BZD3 368 aaPredicted RBP13.13□□□□□ -0.31
SDCBP-211ENST00000523441 ARHGEF3Q9NR81 526 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 MRPL17Q9NRX2 175 aaKnown RBP13.13□□□□□ -0.31
SDCBP-211ENST00000523441 NRBP2Q9NSY0 501 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 SEPT9Q9UHD8 586 aaPredicted RBP13.13□□□□□ -0.31
SDCBP-211ENST00000523441 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 KMT2BQ9UMN6 2715 aaPredicted RBP13.13□□□□□ -0.31
SDCBP-211ENST00000523441 CACNA1IQ9P0X4 2223 aa13.13□□□□□ -0.31
SDCBP-211ENST00000523441 DOCK8Q8NF50 2099 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 IGLV3-22A0A075B6J6 115 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 DCDC2BA2VCK2 349 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 SGSM2O43147 1006 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 ZNF862O60290 1169 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
SDCBP-211ENST00000523441 OFD1O75665 1012 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 URODP06132 367 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 SRFP11831 508 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 AFF1P51825 1210 aaKnown RBP13.12□□□□□ -0.31
SDCBP-211ENST00000523441 ZNF746Q6NUN9 644 aaPredicted RBP13.12□□□□□ -0.31
SDCBP-211ENST00000523441 DCLRE1AQ6PJP8 1040 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 FAM43BQ6ZT52 329 aaPredicted RBP13.12□□□□□ -0.31
SDCBP-211ENST00000523441 TAS1R1Q7RTX1 841 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 CATSPER4Q7RTX7 472 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 RHPN2Q8IUC4 686 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 LINC01465Q8N7H1 131 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 URGCPQ8TCY9 931 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 STAMQ92783 540 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 FAM167AQ96KS9 214 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 B3GALT6Q96L58 329 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 NLRP4Q96MN2 994 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 TBC1D22BQ9NU19 505 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 FAM105AQ9NUU6 356 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 SPATA6Q9NWH7 488 aaPredicted RBP13.12□□□□□ -0.31
SDCBP-211ENST00000523441 FAN1Q9Y2M0 1017 aa13.12□□□□□ -0.31
SDCBP-211ENST00000523441 OTOGLQ3ZCN5 2332 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 GLULP15104 373 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 SFPQP23246 707 aaKnown RBP eCLIP13.11□□□□□ -0.31
SDCBP-211ENST00000523441 OR1G1P47890 313 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 CSTF1Q05048 431 aaKnown RBP13.11□□□□□ -0.31
SDCBP-211ENST00000523441 AP3B2Q13367 1082 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
SDCBP-211ENST00000523441 UBXN2BQ14CS0 331 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 RTN1Q16799 776 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 PPP1R18Q6NYC8 613 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 NIPA1Q7RTP0 329 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 SMAP1Q8IYB5 467 aaPredicted RBP13.11□□□□□ -0.31
SDCBP-211ENST00000523441 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 MAP4K1Q92918 833 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 WDR6Q9NNW5 1121 aaKnown RBP13.11□□□□□ -0.31
SDCBP-211ENST00000523441 DISC1Q9NRI5 854 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 DLL3Q9NYJ7 618 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 USP18Q9UMW8 372 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 DOCK6Q96HP0 2047 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
SDCBP-211ENST00000523441 PATJQ8NI35 1801 aa13.11□□□□□ -0.31
SDCBP-211ENST00000523441 MTCL1Q9Y4B5 1905 aaKnown RBP13.1□□□□□ -0.31
SDCBP-211ENST00000523441 WDR64B1ANS9 1081 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 NRP1O14786 923 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 SLC27A2O14975 620 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 TEX28O15482 410 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 GLUD1P00367 558 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 ALDH2P05091 517 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 ADH1AP07327 375 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 LIFRP42702 1097 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 C15orf39Q6ZRI6 1047 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 PJA1Q8NG27 643 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 CHAMP1Q96JM3 812 aa13.1□□□□□ -0.31
SDCBP-211ENST00000523441 RPP25Q9BUL9 199 aaKnown RBP13.1□□□□□ -0.31
SDCBP-211ENST00000523441 BMP2KQ9NSY1 1161 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms