RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 CDK17Q00537 523 aa22.71■■□□□ 1.23
SQLE-206ENST00000523430 CBWD6Q4V339 395 aa22.71■■□□□ 1.23
SQLE-206ENST00000523430 CBWD3Q5JTY5 395 aa22.71■■□□□ 1.23
SQLE-206ENST00000523430 CBWD5Q5RIA9 395 aa22.71■■□□□ 1.23
SQLE-206ENST00000523430 PRIMPOLQ96LW4 560 aa22.71■■□□□ 1.23
SQLE-206ENST00000523430 ARHGAP20Q9P2F6 1191 aa22.71■■□□□ 1.23
SQLE-206ENST00000523430 RBM47A0AV96 593 aaKnown RBP22.7■■□□□ 1.22
SQLE-206ENST00000523430 GOLGA8IPA6NC78 632 aa22.7■■□□□ 1.22
SQLE-206ENST00000523430 DCAF8L1A6NGE4 600 aa22.7■■□□□ 1.22
SQLE-206ENST00000523430 GOLGA8JA6NMD2 632 aa22.7■■□□□ 1.22
SQLE-206ENST00000523430 MAFO75444 373 aaPredicted RBP22.7■■□□□ 1.22
SQLE-206ENST00000523430 CNGA1P29973 690 aa22.7■■□□□ 1.22
SQLE-206ENST00000523430 FMO5P49326 533 aa22.7■■□□□ 1.22
SQLE-206ENST00000523430 DLG4P78352 724 aa22.7■■□□□ 1.22
SQLE-206ENST00000523430 SAAL1Q96ER3 474 aa22.7■■□□□ 1.22
SQLE-206ENST00000523430 LRRIQ4A6NIV6 560 aa22.69■■□□□ 1.22
SQLE-206ENST00000523430 HNRNPDLO14979 420 aaKnown RBP22.69■■□□□ 1.22
SQLE-206ENST00000523430 ADRB2P07550 413 aa22.69■■□□□ 1.22
SQLE-206ENST00000523430 NAMPTP43490 491 aa22.69■■□□□ 1.22
SQLE-206ENST00000523430 ETF1P62495 437 aaKnown RBP22.69■■□□□ 1.22
SQLE-206ENST00000523430 GBP6Q6ZN66 633 aa22.69■■□□□ 1.22
SQLE-206ENST00000523430 SIX2Q9NPC8 291 aa22.69■■□□□ 1.22
SQLE-206ENST00000523430 PLCB1Q9NQ66 1216 aa22.69■■□□□ 1.22
SQLE-206ENST00000523430 GTPBP10A4D1E9 387 aaKnown RBP22.68■■□□□ 1.22
SQLE-206ENST00000523430 SLC15A5A6NIM6 579 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 GH1P01241 217 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 LAMC2Q13753 1193 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 KLHDC7AQ5VTJ3 777 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 INTS8Q75QN2 995 aaKnown RBP22.68■■□□□ 1.22
SQLE-206ENST00000523430 IFNL1Q8IU54 200 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 CBWD2Q8IUF1 395 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 PLEKHO2Q8TD55 490 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 TRAPPC12Q8WVT3 735 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 AJAP1Q9UKB5 411 aaPredicted RBP22.68■■□□□ 1.22
SQLE-206ENST00000523430 TRPC6Q9Y210 931 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 USP20Q9Y2K6 914 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 FHOD1Q9Y613 1164 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 H0YCG3 227 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 RIOK3O14730 519 aaKnown RBP22.68■■□□□ 1.22
SQLE-206ENST00000523430 KRT13P13646 458 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 CAPSQ13938 189 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 KIF18AQ8NI77 898 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 DEPTORQ8TB45 409 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 BICD1Q96G01 975 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 TINF2Q9BSI4 451 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 SMARCAD1Q9H4L7 1026 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 ZCCHC17Q9NP64 241 aaKnown RBP22.68■■□□□ 1.22
SQLE-206ENST00000523430 DNAI1Q9UI46 699 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 PAXBP1Q9Y5B6 917 aa22.68■■□□□ 1.22
SQLE-206ENST00000523430 FAM155AB1AL88 458 aaPredicted RBP22.67■■□□□ 1.22
SQLE-206ENST00000523430 TLR2O60603 784 aa22.67■■□□□ 1.22
SQLE-206ENST00000523430 UCHL3P15374 230 aa22.67■■□□□ 1.22
SQLE-206ENST00000523430 VAMP7P51809 220 aa22.67■■□□□ 1.22
SQLE-206ENST00000523430 MYL7Q01449 175 aa22.67■■□□□ 1.22
SQLE-206ENST00000523430 MORN1Q5T089 497 aa22.67■■□□□ 1.22
SQLE-206ENST00000523430 CCDC170Q8IYT3 715 aa22.67■■□□□ 1.22
SQLE-206ENST00000523430 AFG1LQ8WV93 481 aa22.67■■□□□ 1.22
SQLE-206ENST00000523430 IRX2Q9BZI1 471 aaPredicted RBP22.67■■□□□ 1.22
SQLE-206ENST00000523430 ZHX1Q9UKY1 873 aaPredicted RBP22.67■■□□□ 1.22
SQLE-206ENST00000523430 PPME1Q9Y570 386 aa22.67■■□□□ 1.22
SQLE-206ENST00000523430 ABL1P00519 1130 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 LGALS2P05162 132 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 CYLC1P35663 651 aaPredicted RBP22.66■■□□□ 1.22
SQLE-206ENST00000523430 ARHGAP25P42331 645 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 SLC26A2P50443 739 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 MKRN4PQ13434 485 aaPredicted RBP22.66■■□□□ 1.22
SQLE-206ENST00000523430 RAPGEF1Q13905 1077 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 SNRNP35Q16560 246 aaKnown RBP22.66■■□□□ 1.22
SQLE-206ENST00000523430 C1orf220Q5T0J3 134 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 SFMBT2Q5VUG0 894 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 HGSNATQ68CP4 663 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 LRRC71Q8N4P6 559 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 PPTC7Q8NI37 304 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 POMGNT1Q8WZA1 660 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 ZBTB10Q96DT7 871 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 TLL2Q9Y6L7 1015 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 PHLPP2Q6ZVD8 1323 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 MAPK13O15264 365 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 ZNF286BP0CG31 522 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 SMPD1P17405 629 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 BRDTQ58F21 947 aaPredicted RBP22.66■■□□□ 1.22
SQLE-206ENST00000523430 GJB7Q6PEY0 223 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 EMID1Q96A84 441 aaPredicted RBP22.66■■□□□ 1.22
SQLE-206ENST00000523430 WDR24Q96S15 920 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 TFR2Q9UP52 801 aa22.66■■□□□ 1.22
SQLE-206ENST00000523430 UQCRHLA0A096LP55 91 aa22.65■■□□□ 1.22
SQLE-206ENST00000523430 ADCY6O43306 1168 aa22.65■■□□□ 1.22
SQLE-206ENST00000523430 EDN1P05305 212 aa22.65■■□□□ 1.22
SQLE-206ENST00000523430 UQCRHP07919 91 aa22.65■■□□□ 1.22
SQLE-206ENST00000523430 EIF4A3P38919 411 aaKnown RBP22.65■■□□□ 1.22
SQLE-206ENST00000523430 TERF1P54274 439 aa22.65■■□□□ 1.22
SQLE-206ENST00000523430 GNG11P61952 73 aa22.65■■□□□ 1.22
SQLE-206ENST00000523430 PPP3CAQ08209 521 aa22.65■■□□□ 1.22
SQLE-206ENST00000523430 ACVR2BQ13705 512 aa22.65■■□□□ 1.22
SQLE-206ENST00000523430 C17orf99Q6UX52 265 aa22.65■■□□□ 1.22
SQLE-206ENST00000523430 PRPF31Q8WWY3 499 aaKnown RBP22.65■■□□□ 1.22
SQLE-206ENST00000523430 SYN2Q92777 582 aaPredicted RBP22.65■■□□□ 1.22
SQLE-206ENST00000523430 KCNN1Q92952 543 aa22.65■■□□□ 1.22
SQLE-206ENST00000523430 CCDC42Q96M95 316 aa22.65■■□□□ 1.22
SQLE-206ENST00000523430 NUCKS1Q9H1E3 243 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms