RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 CYP2W1Q8TAV3 490 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 MOV10L1Q9BXT6 1211 aaKnown RBP14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 TOPORSQ9NS56 1045 aaPredicted RBP14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 UCHL3P15374 230 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 STX2P32856 288 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 SOX5P35711 763 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 RINT1Q6NUQ1 792 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 B4GALNT4Q76KP1 1039 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 SYT2Q8N9I0 419 aaPredicted RBP14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 FAM71BQ8TC56 605 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 KIFC3Q9BVG8 833 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 SLC38A10Q9HBR0 1119 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 TRIM10Q9UDY6 481 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 NFU1Q9UMS0 254 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 A6NNZ2 444 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 ATP1A1P05023 1023 aaKnown RBP14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 HSPA6P17066 643 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 FMO5P49326 533 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 TUBB8Q3ZCM7 444 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 PPP1R2P3Q6NXS1 205 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 FAM83AQ86UY5 434 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 ELOA2Q8IYF1 753 aaPredicted RBP14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 GMCL1P1Q8NEA9 526 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 HEMGNQ9BXL5 484 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 DNAJC17Q9NVM6 304 aaKnown RBP14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 INPP5FQ9Y2H2 1132 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 FHOD1Q9Y613 1164 aa14.04□□□□□ -0.16
PCDHGB1-201ENST00000523390 POC1B-GALNT4F8VUJ3 575 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 TNPO2O14787 897 aaKnown RBP14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 CYP26A1O43174 497 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 CTIFO43310 598 aaKnown RBP14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 DDNO94850 711 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 CIITAP33076 1130 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 ARPP19P56211 112 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 DSTYKQ6XUX3 929 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 POLR3CQ9BUI4 534 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 ZWILCHQ9H900 591 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 PRKCBP05771 671 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 GYS2P54840 703 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 YWHAGP61981 247 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 C9orf131Q5VYM1 1079 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 OSBPL9Q96SU4 736 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 SUCLA2Q9P2R7 463 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 PPP1R9AQ9ULJ8 1098 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 CCL15-CCL14A0A0B4J2E2 113 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 GOLGA8KD6RF30 607 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 ZNF18P17022 549 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 PSMA2P25787 234 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 SARNPP82979 210 aaKnown RBP14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 TNFAIP2Q03169 654 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 CASP8Q14790 479 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 EMC2Q15006 297 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 CCL15Q16663 113 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 C15orf52Q6ZUT6 534 aaKnown RBP14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 METTL23Q86XA0 190 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 CCDC13Q8IYE1 715 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 RNF10Q8N5U6 811 aaKnown RBP14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 ANKS1AQ92625 1134 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 P3H4Q92791 437 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 HOMER3Q9NSC5 361 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 FAM198AQ9UFP1 575 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 FAN1Q9Y2M0 1017 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 ITIH6Q6UXX5 1313 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 NALCNQ8IZF0 1738 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 DYNC1LI2O43237 492 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 MAN1A1P33908 653 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 DR1Q01658 176 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 LMNB2Q03252 620 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 ARHGEF6Q15052 776 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 PDZD4Q76G19 769 aaPredicted RBP14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 KCTD6Q8NC69 237 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 BBOF1Q8ND07 529 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 CCNYQ8ND76 341 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 GPRC5CQ9NQ84 441 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 SCINQ9Y6U3 715 aa14.03□□□□□ -0.16
PCDHGB1-201ENST00000523390 SLC16A3O15427 465 aaKnown RBP14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 PRPSAP2O60256 369 aa14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 GNA15P30679 374 aa14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 SNRNP35Q16560 246 aaKnown RBP14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 SIX6OS1Q8N1H7 587 aa14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 LRRC71Q8N4P6 559 aa14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 ADCY1Q08828 1119 aa14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 DUOXA2Q1HG44 320 aa14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 KCNV1Q6PIU1 500 aa14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 CCDC110Q8TBZ0 833 aa14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 ZNF564Q8TBZ8 553 aaPredicted RBP14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 ZCCHC17Q9NP64 241 aaKnown RBP14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 KCND2Q9NZV8 630 aa14.02□□□□□ -0.16
PCDHGB1-201ENST00000523390 ESYT3A0FGR9 886 aa14.02□□□□□ -0.17
PCDHGB1-201ENST00000523390 CSPG5O95196 566 aa14.02□□□□□ -0.17
PCDHGB1-201ENST00000523390 EFNA5P52803 228 aa14.02□□□□□ -0.17
PCDHGB1-201ENST00000523390 GEN1Q17RS7 908 aa14.02□□□□□ -0.17
PCDHGB1-201ENST00000523390 GSPT2Q8IYD1 628 aaKnown RBP14.02□□□□□ -0.17
PCDHGB1-201ENST00000523390 CHST13Q8NET6 341 aa14.02□□□□□ -0.17
PCDHGB1-201ENST00000523390 NUP85Q9BW27 656 aa14.02□□□□□ -0.17
PCDHGB1-201ENST00000523390 DDX47Q9H0S4 455 aaKnown RBP14.02□□□□□ -0.17
PCDHGB1-201ENST00000523390 XRN1Q8IZH2 1706 aaKnown RBP14.02□□□□□ -0.17
PCDHGB1-201ENST00000523390 MCF2LO15068 1137 aa14.02□□□□□ -0.17
PCDHGB1-201ENST00000523390 ZRANB2O95218 330 aaKnown RBP eCLIP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms