RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 GRAMD1AQ96CP6 724 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 RXFP1Q9HBX9 757 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 BCS1LQ9Y276 419 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 PCDHA1Q9Y5I3 950 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 PALM3A6NDB9 673 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-212ENST00000523387 hCG_1984214I3L0E3 225 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 UPP2O95045 317 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 RARGP13631 454 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 MMP13P45452 471 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 GPC5P78333 572 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 KRT17Q04695 432 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 CNGA2Q16280 664 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 LRRC23Q53EV4 343 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-212ENST00000523387 BTNL9Q6UXG8 535 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 ZNF713Q8N859 430 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-212ENST00000523387 CFAP61Q8NHU2 1237 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 ROPN1BQ9BZX4 212 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-212ENST00000523387 GLT8D2Q9H1C3 349 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 ROPN1Q9HAT0 212 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-212ENST00000523387 IL17RBQ9NRM6 502 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 ZFP69BQ9UJL9 534 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 HAO1Q9UJM8 370 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 DCTN4Q9UJW0 460 aa9.69□□□□□ -0.86
CSMD1-212ENST00000523387 RTCBQ9Y3I0 505 aaKnown RBP9.69□□□□□ -0.86
CSMD1-212ENST00000523387 USP17L15C9J2P7 530 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 USP17L13C9JLJ4 530 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 USP17L11C9JVI0 530 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 USP17L18D6R9N7 530 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 USP17L22D6RA61 530 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 USP17L17D6RBQ6 530 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 USP17L19D6RCP7 530 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 USP17L20D6RJB6 530 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 IFNB1P01574 187 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 MYBP10242 640 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 RPL21P46778 160 aaKnown RBP9.68□□□□□ -0.86
CSMD1-212ENST00000523387 RBM5P52756 815 aaKnown RBP eCLIP9.68□□□□□ -0.86
CSMD1-212ENST00000523387 CDR2Q01850 454 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 USP17L24Q0WX57 530 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 USP17L6PQ6QN14 398 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 CEP128Q6ZU80 1094 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 KCTD1Q719H9 257 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 FAXDC2Q96IV6 333 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 MOV10L1Q9BXT6 1211 aaKnown RBP9.68□□□□□ -0.86
CSMD1-212ENST00000523387 GANQ9H2C0 597 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 WTIPA6NIX2 430 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-212ENST00000523387 H0YGN5 161 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 RIPK2O43353 540 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 PAPOLAP51003 745 aaKnown RBP9.68□□□□□ -0.86
CSMD1-212ENST00000523387 DNAJC3Q13217 504 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 ODR4Q5SWX8 454 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 EMC10Q5UCC4 262 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 APBB1IPQ7Z5R6 666 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-212ENST00000523387 PHLDB2Q86SQ0 1253 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 PIGOQ8TEQ8 1089 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 KIFAP3Q92845 792 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 TLCD1Q96CP7 247 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 C9orf72Q96LT7 481 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 FGD4Q96M96 766 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 AGAP1Q9UPQ3 857 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 THRAP3Q9Y2W1 955 aaKnown RBP9.68□□□□□ -0.86
CSMD1-212ENST00000523387 NFS1Q9Y697 457 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 O00370 1275 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 MAP3K7O43318 606 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 OPHN1O60890 802 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 TTLL1O95922 423 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 LMNAP02545 664 aaKnown RBP9.68□□□□□ -0.86
CSMD1-212ENST00000523387 RANBP1P43487 201 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 CASP4P49662 377 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 HP1BP3Q5SSJ5 553 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-212ENST00000523387 DTX3LQ8TDB6 740 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 LRRC15Q8TF66 581 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 RNF25Q96BH1 459 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-212ENST00000523387 STK33Q9BYT3 514 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 ADAM33Q9BZ11 813 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 CDC42EP4Q9H3Q1 356 aaKnown RBP9.68□□□□□ -0.86
CSMD1-212ENST00000523387 PCIF1Q9H4Z3 704 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 SERPINA10Q9UK55 444 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 USH1CQ9Y6N9 552 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 AFF2P51816 1311 aa9.68□□□□□ -0.86
CSMD1-212ENST00000523387 A0A0A6YYK5 440 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 A0A0G2JND7 137 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 ARHGEF35A5YM69 484 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 PDXKO00764 312 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 TXNDC9O14530 226 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 NVLO15381 856 aaKnown RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 NUDT17P0C025 328 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 CYP11B2P19099 503 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 COMTP21964 271 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 MEX3CQ5U5Q3 659 aaKnown RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 AADACL2Q6P093 401 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 PPP1R14CQ8TAE6 165 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 INTS2Q9H0H0 1204 aaKnown RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 CORO1CQ9ULV4 474 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-212ENST00000523387 DISP2A7MBM2 1401 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 PNMA6FA0A0J9YX94 578 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 GYG2O15488 501 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 RASA1P20936 1047 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 MAPK4P31152 587 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 ERFP50548 548 aa9.67□□□□□ -0.86
CSMD1-212ENST00000523387 NPEPPSP55786 919 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms