RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SART1O43290 800 aaKnown RBP17.32■□□□□ 0.36
USP42-207ENST00000521713 TMEM106CQ9BVX2 250 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 CALN1Q9BXU9 219 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 ANAPC5Q9UJX4 755 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 LGALS16A8MUM7 142 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.32■□□□□ 0.36
USP42-207ENST00000521713 DAAM1Q9Y4D1 1078 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 ATP5HO75947 161 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 GCLMP48507 274 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 SGO2Q562F6 1265 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 C9orf131Q5VYM1 1079 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 HAUS6Q7Z4H7 955 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 CEP72Q9P209 647 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 VWDEQ8N2E2 1590 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 MAGEB2O15479 319 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 NDUFA10O95299 355 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 YWHABP31946 246 aaKnown RBP17.32■□□□□ 0.36
USP42-207ENST00000521713 KCTD6Q8NC69 237 aa17.32■□□□□ 0.36
USP42-207ENST00000521713 VAMP7P51809 220 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 SF3A3Q12874 501 aaKnown RBP eCLIP17.31■□□□□ 0.36
USP42-207ENST00000521713 PRAMEF18Q5VWM3 479 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 CLEC10AQ8IUN9 316 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 PLEKHA4Q9H4M7 779 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 PRCPP42785 496 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 CREB3O43889 395 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 GUCY1A2P33402 732 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 KRT39Q6A163 491 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 ST13P4Q8IZP2 240 aaPredicted RBP17.31■□□□□ 0.36
USP42-207ENST00000521713 SCFD2Q8WU76 684 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 MTIF3Q9H2K0 278 aaKnown RBP17.31■□□□□ 0.36
USP42-207ENST00000521713 COL5A2P05997 1499 aaPredicted RBP17.31■□□□□ 0.36
USP42-207ENST00000521713 IQGAP1P46940 1657 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 ZBBXA8MT70 800 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 DYNC1LI2O43237 492 aaPredicted RBP17.31■□□□□ 0.36
USP42-207ENST00000521713 KCNH2Q12809 1159 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 MXD4Q14582 209 aaPredicted RBP17.31■□□□□ 0.36
USP42-207ENST00000521713 ENOSF1Q7L5Y1 443 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 RYBPQ8N488 228 aaPredicted RBP17.31■□□□□ 0.36
USP42-207ENST00000521713 KCTD17Q8N5Z5 321 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
USP42-207ENST00000521713 ADAMTS1Q9UHI8 967 aa17.31■□□□□ 0.36
USP42-207ENST00000521713 SERPINB6P35237 376 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 TOGARAM2Q6ZUX3 1019 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 ADAM22Q9P0K1 906 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 NFKBIAP25963 317 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 GTF2A2P52657 109 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 DEUP1Q05D60 604 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 CYFIP1Q7L576 1253 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 TTC1Q99614 292 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 FGFR1OP2Q9NVK5 253 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 STRIP2Q9ULQ0 834 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 PPP2R3BQ9Y5P8 575 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 BCL9O00512 1426 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 KBTBD13C9JR72 458 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 PLSCR1O15162 318 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 YWHAGP61981 247 aaKnown RBP eCLIP17.3■□□□□ 0.36
USP42-207ENST00000521713 KCNB1Q14721 858 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 C4orf50Q6ZRC1 276 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 PDCD7Q8N8D1 485 aaKnown RBP17.3■□□□□ 0.36
USP42-207ENST00000521713 CALR3Q96L12 384 aaKnown RBP17.3■□□□□ 0.36
USP42-207ENST00000521713 ZNF560Q96MR9 790 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 SLITRK6Q9H5Y7 841 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 KCND2Q9NZV8 630 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 ESYT2A0FGR8 921 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 POLE2P56282 527 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 RIT2Q99578 217 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 NUDT12Q9BQG2 462 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 AGO2Q9UKV8 859 aaKnown RBP17.3■□□□□ 0.36
USP42-207ENST00000521713 PCDHA13Q9Y5I0 950 aa17.3■□□□□ 0.36
USP42-207ENST00000521713 PP2D1A8MPX8 630 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 ATP1A3P13637 1013 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 ERO1BQ86YB8 467 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 GPD1LQ8N335 351 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 RNF149Q8NC42 400 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 PRMT6Q96LA8 375 aaPredicted RBP17.29■□□□□ 0.36
USP42-207ENST00000521713 ZMAT2Q96NC0 199 aaKnown RBP17.29■□□□□ 0.36
USP42-207ENST00000521713 VPS33BQ9H267 617 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 ENC1O14682 589 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 ECEL1O95672 775 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 C6orf222P0C671 652 aaPredicted RBP17.29■□□□□ 0.36
USP42-207ENST00000521713 CAP2P40123 477 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 ELMOD1Q8N336 334 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 BPIFA3Q9BQP9 254 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 ARHGAP23Q9P227 1491 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 CALB1P05937 261 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 CYP2B6P20813 491 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 IFNAR2P48551 515 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 DRP2Q13474 957 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 DUOXA2Q1HG44 320 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 JMJD4Q9H9V9 463 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 RBAKQ9NYW8 714 aaPredicted RBP17.29■□□□□ 0.36
USP42-207ENST00000521713 ANO9A1A5B4 782 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 SPDYE2BA6NHP3 402 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 MFAP3LO75121 409 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 SPDYE6P0CI01 402 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 ACTN1P12814 892 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 ECE1P42892 770 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 ADCY2Q08462 1091 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 C6orf118Q5T5N4 469 aa17.29■□□□□ 0.36
USP42-207ENST00000521713 ZNF449Q6P9G9 518 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms