RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 ETNPPLQ8TBG4 499 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 IGSF21Q96ID5 467 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 MBOAT7Q96N66 472 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 FAM105AQ9NUU6 356 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 CDH22Q9UJ99 828 aa16.71■□□□□ 0.27
PRKDC-204ENST00000521331 TMEM150BA6NC51 233 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 CPLX1O14810 134 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 ST18O60284 1047 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 ZNF623O75123 536 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 GALTP07902 379 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 RNASELQ05823 741 aaKnown RBP16.7■□□□□ 0.26
PRKDC-204ENST00000521331 ATAT1Q5SQI0 421 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 RARS2Q5T160 578 aaKnown RBP16.7■□□□□ 0.26
PRKDC-204ENST00000521331 KIAA1841Q6NSI8 718 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 PPFIBP1Q86W92 1011 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 TMEM173Q86WV6 379 aaPredicted RBP16.7■□□□□ 0.26
PRKDC-204ENST00000521331 EXOC8Q8IYI6 725 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 TDRD5Q8NAT2 981 aaKnown RBP16.7■□□□□ 0.26
PRKDC-204ENST00000521331 LPPQ93052 612 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 PGBD4Q96DM1 585 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 NLRP4Q96MN2 994 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 TBC1D13Q9NVG8 400 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 USTQ9Y2C2 406 aa16.7■□□□□ 0.26
PRKDC-204ENST00000521331 M0R2N6 131 aa16.69■□□□□ 0.26
PRKDC-204ENST00000521331 DKC1O60832 514 aaKnown RBP eCLIP16.69■□□□□ 0.26
PRKDC-204ENST00000521331 BRD1O95696 1058 aa16.69■□□□□ 0.26
PRKDC-204ENST00000521331 NONOQ15233 471 aaKnown RBP eCLIP16.69■□□□□ 0.26
PRKDC-204ENST00000521331 CPLX2Q6PUV4 134 aaKnown RBP16.69■□□□□ 0.26
PRKDC-204ENST00000521331 ANO5Q75V66 913 aa16.69■□□□□ 0.26
PRKDC-204ENST00000521331 RUFY3Q7L099 469 aa16.69■□□□□ 0.26
PRKDC-204ENST00000521331 ZDHHC14Q8IZN3 488 aa16.69■□□□□ 0.26
PRKDC-204ENST00000521331 PLCD3Q8N3E9 789 aa16.69■□□□□ 0.26
PRKDC-204ENST00000521331 ATOH1Q92858 354 aaPredicted RBP16.69■□□□□ 0.26
PRKDC-204ENST00000521331 SH2D3AQ9BRG2 576 aa16.69■□□□□ 0.26
PRKDC-204ENST00000521331 NRDE2Q9H7Z3 1164 aa16.69■□□□□ 0.26
PRKDC-204ENST00000521331 DDX25Q9UHL0 483 aaKnown RBP16.69■□□□□ 0.26
PRKDC-204ENST00000521331 DBR1Q9UK59 544 aaKnown RBP16.69■□□□□ 0.26
PRKDC-204ENST00000521331 INPP5FQ9Y2H2 1132 aa16.69■□□□□ 0.26
PRKDC-204ENST00000521331 PPME1Q9Y570 386 aa16.69■□□□□ 0.26
PRKDC-204ENST00000521331 OFD1O75665 1012 aa16.68■□□□□ 0.26
PRKDC-204ENST00000521331 PDGFBP01127 241 aaPredicted RBP16.68■□□□□ 0.26
PRKDC-204ENST00000521331 TOB2Q14106 344 aaPredicted RBP16.68■□□□□ 0.26
PRKDC-204ENST00000521331 LONRF3Q496Y0 759 aa16.68■□□□□ 0.26
PRKDC-204ENST00000521331 KRT25Q7Z3Z0 450 aa16.68■□□□□ 0.26
PRKDC-204ENST00000521331 CABP7Q86V35 215 aa16.68■□□□□ 0.26
PRKDC-204ENST00000521331 C12orf76Q8N812 135 aaPredicted RBP16.68■□□□□ 0.26
PRKDC-204ENST00000521331 URGCPQ8TCY9 931 aa16.68■□□□□ 0.26
PRKDC-204ENST00000521331 SLC22A17Q8WUG5 538 aa16.68■□□□□ 0.26
PRKDC-204ENST00000521331 AUTS2Q8WXX7 1259 aa16.68■□□□□ 0.26
PRKDC-204ENST00000521331 SLC7A3Q8WY07 619 aa16.68■□□□□ 0.26
PRKDC-204ENST00000521331 ZNF274Q96GC6 653 aaPredicted RBP16.68■□□□□ 0.26
PRKDC-204ENST00000521331 ZSWIM6Q9HCJ5 1215 aa16.68■□□□□ 0.26
PRKDC-204ENST00000521331 CYP26B1Q9NR63 512 aa16.68■□□□□ 0.26
PRKDC-204ENST00000521331 AGPAT5Q9NUQ2 364 aa16.68■□□□□ 0.26
PRKDC-204ENST00000521331 ZFHX2Q9C0A1 2572 aaPredicted RBP16.67■□□□□ 0.26
PRKDC-204ENST00000521331 EPB41L2O43491 1005 aaKnown RBP16.67■□□□□ 0.26
PRKDC-204ENST00000521331 GALR2O43603 387 aaPredicted RBP16.67■□□□□ 0.26
PRKDC-204ENST00000521331 WEE2P0C1S8 567 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 EPCAMP16422 314 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 QARSP47897 775 aaKnown RBP16.67■□□□□ 0.26
PRKDC-204ENST00000521331 SLC11A1P49279 550 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 PPP2R5CQ13362 524 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 KSR1Q8IVT5 923 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 BCL7CQ8WUZ0 217 aaPredicted RBP16.67■□□□□ 0.26
PRKDC-204ENST00000521331 FAM20AQ96MK3 541 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 EMILIN2Q9BXX0 1053 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 GBP3Q9H0R5 595 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 SFXN1Q9H9B4 322 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 IFT122Q9HBG6 1241 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 FAM86C1Q9NVL1 165 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 KANSL3Q9P2N6 904 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 PCDHB2Q9Y5E7 798 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 COL4A3BPQ9Y5P4 624 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 CYP46A1Q9Y6A2 500 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 KMT2EQ8IZD2 1858 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 CNTNAP2Q9UHC6 1331 aa16.67■□□□□ 0.26
PRKDC-204ENST00000521331 MEIS3P2A8K0S8 358 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 SLC37A4O43826 429 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 GFRA3O60609 400 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 PTPN14Q15678 1187 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 NPY5RQ15761 445 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 INF2Q27J81 1249 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 LETM2Q2VYF4 491 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 PLA2G4FQ68DD2 849 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 SRGAP1Q7Z6B7 1085 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 MRPL10Q7Z7H8 261 aaKnown RBP16.66■□□□□ 0.26
PRKDC-204ENST00000521331 PSPC1Q8WXF1 523 aaKnown RBP16.66■□□□□ 0.26
PRKDC-204ENST00000521331 ACSF2Q96CM8 615 aaPredicted RBP16.66■□□□□ 0.26
PRKDC-204ENST00000521331 TMEM175Q9BSA9 504 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 RSAD1Q9HA92 442 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 DNAJB4Q9UDY4 337 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 LIMD1Q9UGP4 676 aa16.66■□□□□ 0.26
PRKDC-204ENST00000521331 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 H0Y858 1186 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 EML1O00423 815 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 GAS2O43903 313 aaKnown RBP16.65■□□□□ 0.26
PRKDC-204ENST00000521331 ALDH2P05091 517 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 P4HBP07237 508 aaKnown RBP16.65■□□□□ 0.26
PRKDC-204ENST00000521331 ASGR2P07307 311 aa16.65■□□□□ 0.26
PRKDC-204ENST00000521331 GCFC2P16383 781 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms