RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 KIFC3Q9BVG8 833 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 SLC39A2Q9NP94 309 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 TMEM39AQ9NV64 488 aa19.62■□□□□ 0.73
SDC2-205ENST00000520233 PHLPP2Q6ZVD8 1323 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 BIN1O00499 593 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 DARSP14868 501 aaKnown RBP19.61■□□□□ 0.73
SDC2-205ENST00000520233 SELPP16109 830 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 TRAF7Q6Q0C0 670 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 STXBP4Q6ZWJ1 553 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 KIAA0895Q8NCT3 520 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 OSMRQ99650 979 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 STRA6Q9BX79 667 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 FGFBP2Q9BYJ0 223 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 INO80BQ9C086 356 aaPredicted RBP19.61■□□□□ 0.73
SDC2-205ENST00000520233 HIPK3Q9H422 1215 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 TMEM134Q9H6X4 195 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 GINS2Q9Y248 185 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 PCDHB13Q9Y5F0 798 aa19.61■□□□□ 0.73
SDC2-205ENST00000520233 PPP1R37O75864 691 aa19.6■□□□□ 0.73
SDC2-205ENST00000520233 GCNT3O95395 438 aa19.6■□□□□ 0.73
SDC2-205ENST00000520233 EIF4BP23588 611 aaKnown RBP19.6■□□□□ 0.73
SDC2-205ENST00000520233 GTF2BQ00403 316 aa19.6■□□□□ 0.73
SDC2-205ENST00000520233 ISM2Q6H9L7 571 aa19.6■□□□□ 0.73
SDC2-205ENST00000520233 LRRC8DQ7L1W4 858 aa19.6■□□□□ 0.73
SDC2-205ENST00000520233 EPM2AIP1Q7L775 607 aaPredicted RBP19.6■□□□□ 0.73
SDC2-205ENST00000520233 HVCN1Q96D96 273 aa19.6■□□□□ 0.73
SDC2-205ENST00000520233 CCDC113Q9H0I3 377 aa19.6■□□□□ 0.73
SDC2-205ENST00000520233 GDAQ9Y2T3 454 aa19.6■□□□□ 0.73
SDC2-205ENST00000520233 SQORQ9Y6N5 450 aa19.6■□□□□ 0.73
SDC2-205ENST00000520233 MYH11P35749 1972 aa19.59■□□□□ 0.73
SDC2-205ENST00000520233 DENND3A2RUS2 1198 aa19.59■□□□□ 0.73
SDC2-205ENST00000520233 K7ERI5 159 aa19.59■□□□□ 0.73
SDC2-205ENST00000520233 KIAA0355O15063 1070 aa19.59■□□□□ 0.73
SDC2-205ENST00000520233 EIF3DO15371 548 aaKnown RBP eCLIP19.59■□□□□ 0.73
SDC2-205ENST00000520233 MYBP10242 640 aa19.59■□□□□ 0.73
SDC2-205ENST00000520233 BMP6P22004 513 aa19.59■□□□□ 0.73
SDC2-205ENST00000520233 CASP5P51878 434 aa19.59■□□□□ 0.73
SDC2-205ENST00000520233 MBTD1Q05BQ5 628 aa19.59■□□□□ 0.73
SDC2-205ENST00000520233 ZC2HC1CQ53FD0 456 aaPredicted RBP19.59■□□□□ 0.73
SDC2-205ENST00000520233 COBLL1Q53SF7 1204 aa19.59■□□□□ 0.73
SDC2-205ENST00000520233 SASS6Q6UVJ0 657 aa19.59■□□□□ 0.73
SDC2-205ENST00000520233 GLIS3Q8NEA6 775 aa19.59■□□□□ 0.73
SDC2-205ENST00000520233 MINDY3Q9H8M7 445 aa19.59■□□□□ 0.73
SDC2-205ENST00000520233 UBE4BO95155 1302 aa19.58■□□□□ 0.73
SDC2-205ENST00000520233 INO80B-WBP1J3KQ70 363 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 KIF20AO95235 890 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 PARNO95453 639 aaKnown RBP19.58■□□□□ 0.72
SDC2-205ENST00000520233 IQCF3P0C7M6 154 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 NLRP12P59046 1061 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 PCBP1Q15365 356 aaKnown RBP eCLIP19.58■□□□□ 0.722e-14■■□□□ 13.1
SDC2-205ENST00000520233 MAPK6Q16659 721 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 FAM187BQ17R55 369 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 ZSCAN23Q3MJ62 389 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 FBXO47Q5MNV8 452 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 L1TD1Q5T7N2 865 aaKnown RBP19.58■□□□□ 0.72
SDC2-205ENST00000520233 TAS1R3Q7RTX0 852 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 USP38Q8NB14 1042 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 ZNF507Q8TCN5 953 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 TMEM40Q8WWA1 233 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 PPP1R12CQ9BZL4 782 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 FZD8Q9H461 694 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 PRMT7Q9NVM4 692 aaPredicted RBP19.58■□□□□ 0.72
SDC2-205ENST00000520233 TBX20Q9UMR3 447 aa19.58■□□□□ 0.72
SDC2-205ENST00000520233 UMODL1Q5DID0 1318 aa19.57■□□□□ 0.72
SDC2-205ENST00000520233 SYCE3A1L190 88 aa19.57■□□□□ 0.72
SDC2-205ENST00000520233 TRIM43BA6NCK2 446 aa19.57■□□□□ 0.72
SDC2-205ENST00000520233 CSDE1O75534 798 aaKnown RBP19.57■□□□□ 0.72
SDC2-205ENST00000520233 PRPF6O94906 941 aaKnown RBP19.57■□□□□ 0.72
SDC2-205ENST00000520233 PPP1R2P41236 205 aa19.57■□□□□ 0.72
SDC2-205ENST00000520233 STRN3Q13033 797 aa19.57■□□□□ 0.72
SDC2-205ENST00000520233 BMT2Q1RMZ1 405 aa19.57■□□□□ 0.72
SDC2-205ENST00000520233 PPP4R3CPQ6ZMV5 832 aa19.57■□□□□ 0.72
SDC2-205ENST00000520233 SMYD4Q8IYR2 804 aaPredicted RBP19.57■□□□□ 0.72
SDC2-205ENST00000520233 MYOCDQ8IZQ8 938 aa19.57■□□□□ 0.72
SDC2-205ENST00000520233 GUF1Q8N442 669 aaKnown RBP19.57■□□□□ 0.72
SDC2-205ENST00000520233 SCFD1Q8WVM8 642 aa19.57■□□□□ 0.72
SDC2-205ENST00000520233 TRIM43Q96BQ3 446 aaPredicted RBP19.57■□□□□ 0.72
SDC2-205ENST00000520233 PRIMPOLQ96LW4 560 aa19.57■□□□□ 0.72
SDC2-205ENST00000520233 ACCSQ96QU6 501 aa19.57■□□□□ 0.72
SDC2-205ENST00000520233 PRDM5Q9NQX1 630 aaPredicted RBP19.57■□□□□ 0.72
SDC2-205ENST00000520233 NOC2LQ9Y3T9 749 aaKnown RBP19.57■□□□□ 0.72
SDC2-205ENST00000520233 ACKR2O00590 384 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 RPS6KA5O75582 802 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 TIMP1P01033 207 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 PRKCBP05771 671 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 SFPQP23246 707 aaKnown RBP eCLIP19.56■□□□□ 0.721e-6■■■□□ 15.3
SDC2-205ENST00000520233 CYP2C18P33260 490 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 PRCPP42785 496 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 LPIN1Q14693 890 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 TSHZ1Q6ZSZ6 1077 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 MAP4K3Q8IVH8 894 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 MLKLQ8NB16 471 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 WNT8AQ9H1J5 351 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 TMEM206Q9H813 350 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 EXOC7Q9UPT5 735 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 BRCA2P51587 3418 aa19.56■□□□□ 0.72
SDC2-205ENST00000520233 PPP1R3GB7ZBB8 358 aa19.55■□□□□ 0.72
SDC2-205ENST00000520233 EVI5O60447 810 aa19.55■□□□□ 0.72
SDC2-205ENST00000520233 GHRP10912 638 aa19.55■□□□□ 0.72
SDC2-205ENST00000520233 RAG1P15918 1043 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms