RNA–Protein interactions for RNA: ENST00000519470.1

MCM4-208, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-208ENST00000519470 AIFM3Q96NN9 605 aa13.19□□□□□ -0.3
MCM4-208ENST00000519470 SH2D3AQ9BRG2 576 aa13.19□□□□□ -0.3
MCM4-208ENST00000519470 PHF20Q9BVI0 1012 aa13.19□□□□□ -0.3
MCM4-208ENST00000519470 POMKQ9H5K3 350 aa13.19□□□□□ -0.3
MCM4-208ENST00000519470 DHX33Q9H6R0 707 aaKnown RBP13.19□□□□□ -0.3
MCM4-208ENST00000519470 NRDE2Q9H7Z3 1164 aa13.19□□□□□ -0.3
MCM4-208ENST00000519470 IFT122Q9HBG6 1241 aa13.19□□□□□ -0.3
MCM4-208ENST00000519470 CYP26B1Q9NR63 512 aa13.19□□□□□ -0.3
MCM4-208ENST00000519470 DZANK1Q9NVP4 752 aa13.19□□□□□ -0.3
MCM4-208ENST00000519470 VAV3Q9UKW4 847 aa13.19□□□□□ -0.3
MCM4-208ENST00000519470 MEIS3P2A8K0S8 358 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 TBX3O15119 743 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 DKC1O60832 514 aaKnown RBP eCLIP13.18□□□□□ -0.3
MCM4-208ENST00000519470 ZC3H11AO75152 810 aaKnown RBP eCLIP13.18□□□□□ -0.3
MCM4-208ENST00000519470 OFD1O75665 1012 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 CXCL14O95715 111 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 GALTP07902 379 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 GCFC2P16383 781 aaKnown RBP13.18□□□□□ -0.3
MCM4-208ENST00000519470 MTHFRP42898 656 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 QARSP47897 775 aaKnown RBP13.18□□□□□ -0.3
MCM4-208ENST00000519470 NOMO2Q5JPE7 1267 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 KIAA1841Q6NSI8 718 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 CES5AQ6NT32 575 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 GLB1LQ6UWU2 654 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 CATSPER4Q7RTX7 472 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 EXOC8Q8IYI6 725 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 VPS52Q8N1B4 723 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 LPPQ93052 612 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 APOL5Q9BWW9 433 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 AGPAT5Q9NUQ2 364 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 STK39Q9UEW8 545 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 CDH22Q9UJ99 828 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 SORCS3Q9UPU3 1222 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 CACNA1HO95180 2353 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 ARID2Q68CP9 1835 aa13.18□□□□□ -0.3
MCM4-208ENST00000519470 STK36Q9NRP7 1315 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
MCM4-208ENST00000519470 C2CD4DB7Z1M9 353 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 GAS2O43903 313 aaKnown RBP13.17□□□□□ -0.3
MCM4-208ENST00000519470 P4HBP07237 508 aaKnown RBP13.17□□□□□ -0.3
MCM4-208ENST00000519470 NUBP1P53384 320 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 LETM2Q2VYF4 491 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 PLA2G4FQ68DD2 849 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 SRGAP1Q7Z6B7 1085 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 MRPL10Q7Z7H8 261 aaKnown RBP13.17□□□□□ -0.3
MCM4-208ENST00000519470 NEK8Q86SG6 692 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 KSR1Q8IVT5 923 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 C4orf19Q8IY42 314 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 UBALD2Q8IYN6 164 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 SLC22A17Q8WUG5 538 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 BCL7CQ8WUZ0 217 aaPredicted RBP13.17□□□□□ -0.3
MCM4-208ENST00000519470 SLC7A3Q8WY07 619 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 PGBD4Q96DM1 585 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 RIPOR3Q96MK2 946 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 NLRP4Q96MN2 994 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 WRAP73Q9P2S5 460 aaPredicted RBP13.17□□□□□ -0.3
MCM4-208ENST00000519470 USTQ9Y2C2 406 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 COL4A3BPQ9Y5P4 624 aa13.17□□□□□ -0.3
MCM4-208ENST00000519470 CNTNAP2Q9UHC6 1331 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 B4GALT3O60512 393 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 CDKL5O76039 1030 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 AVPR2P30518 371 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 HOXA11P31270 313 aaPredicted RBP13.16□□□□□ -0.3
MCM4-208ENST00000519470 RFC5P40937 340 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 SLC11A1P49279 550 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 VCPP55072 806 aaKnown RBP13.16□□□□□ -0.3
MCM4-208ENST00000519470 NPEPPSP55786 919 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 SCRN1Q12765 414 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 STK3Q13188 491 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 MTMR3Q13615 1198 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 EPHA7Q15375 998 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 PTPN14Q15678 1187 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 AGMOQ6ZNB7 445 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 ZDHHC14Q8IZN3 488 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 ZNF579Q8NAF0 562 aaKnown RBP13.16□□□□□ -0.3
MCM4-208ENST00000519470 KREMEN2Q8NCW0 462 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
MCM4-208ENST00000519470 AUTS2Q8WXX7 1259 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 HAS1Q92839 578 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 PHOX2BQ99453 314 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 NAP1L4Q99733 375 aaKnown RBP13.16□□□□□ -0.3
MCM4-208ENST00000519470 VN1R3Q9BXE9 311 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 DNAJB4Q9UDY4 337 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 KCNJ14Q9UNX9 436 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 PCDHB2Q9Y5E7 798 aa13.16□□□□□ -0.3
MCM4-208ENST00000519470 CCDC194A0A1B0GVG4 234 aa13.15□□□□□ -0.3
MCM4-208ENST00000519470 EPCAMP16422 314 aa13.15□□□□□ -0.3
MCM4-208ENST00000519470 SP100P23497 879 aaPredicted RBP13.15□□□□□ -0.3
MCM4-208ENST00000519470 RNASELQ05823 741 aaKnown RBP13.15□□□□□ -0.3
MCM4-208ENST00000519470 SPIRE1Q08AE8 756 aa13.15□□□□□ -0.3
MCM4-208ENST00000519470 PCBP1Q15365 356 aaKnown RBP eCLIP13.15□□□□□ -0.32e-16■□□□□ 11.3
MCM4-208ENST00000519470 UBXN11Q5T124 520 aa13.15□□□□□ -0.3
MCM4-208ENST00000519470 RARS2Q5T160 578 aaKnown RBP13.15□□□□□ -0.3
MCM4-208ENST00000519470 ZBTB33Q86T24 672 aa13.15□□□□□ -0.3
MCM4-208ENST00000519470 PPFIBP1Q86W92 1011 aa13.15□□□□□ -0.3
MCM4-208ENST00000519470 ZNF280BQ86YH2 543 aa13.15□□□□□ -0.3
MCM4-208ENST00000519470 URGCPQ8TCY9 931 aa13.15□□□□□ -0.3
MCM4-208ENST00000519470 TCP11Q8WWU5 503 aa13.15□□□□□ -0.3
MCM4-208ENST00000519470 PRPF31Q8WWY3 499 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms