RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 GBP3Q9H0R5 595 aa13.2□□□□□ -0.3
TMEM55A-202ENST00000518359 DLL3Q9NYJ7 618 aa13.2□□□□□ -0.3
TMEM55A-202ENST00000518359 CA14Q9ULX7 337 aa13.2□□□□□ -0.3
TMEM55A-202ENST00000518359 SSX2IPQ9Y2D8 614 aa13.2□□□□□ -0.3
TMEM55A-202ENST00000518359 CLUHO75153 1309 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 SSBP05455 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 ADH1AP07327 375 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 CNPP09543 421 aaKnown RBP13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 SDHBP21912 280 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 SLC11A1P49279 550 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 DNM2P50570 870 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 PRKCEQ02156 737 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 JAKMIP3Q5VZ66 844 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 PHLDB3Q6NSJ2 640 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 BCL7CQ8WUZ0 217 aaPredicted RBP13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 LPPQ93052 612 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 BORCS6Q96GS4 357 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 FAM193BQ96PV7 902 aaPredicted RBP13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 RHOBTB2Q9BYZ6 727 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 WDR6Q9NNW5 1121 aaKnown RBP13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 MAN1C1Q9NR34 630 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 FAM105AQ9NUU6 356 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 EPS15L1Q9UBC2 864 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 DNAJB4Q9UDY4 337 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 PIN4Q9Y237 131 aaKnown RBP13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 SIT1Q9Y3P8 196 aa13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 V9GY48 417 aaPredicted RBP13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 KMT2BQ9UMN6 2715 aaPredicted RBP13.19□□□□□ -0.3
TMEM55A-202ENST00000518359 CCDC195A0A1B0GUA6 201 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 KINO60870 393 aaKnown RBP13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 URODP06132 367 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 SP9P0CG40 484 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 RTN1Q16799 776 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 LONRF3Q496Y0 759 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 APOA5Q6Q788 366 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 C1orf210Q8IVY1 113 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 SLC44A3Q8N4M1 653 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 FEZF2Q8TBJ5 459 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 CRYGNQ8WXF5 182 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 RSAD2Q8WXG1 361 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 VN1R3Q9BXE9 311 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 LRRC2Q9BYS8 371 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 ARHGEF3Q9NR81 526 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 DISC1Q9NRI5 854 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 KANSL3Q9P2N6 904 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 PATJQ8NI35 1801 aa13.18□□□□□ -0.3
TMEM55A-202ENST00000518359 TDRD15B5MCY1 1934 aaKnown RBP13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 MYH15Q9Y2K3 1946 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 INPPL1O15357 1258 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 N4BP1O75113 896 aaKnown RBP13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 ZNF623O75123 536 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 CSDE1O75534 798 aaKnown RBP13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 OFD1O75665 1012 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 GLUD1P00367 558 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 ALDH2P05091 517 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 DCNP07585 359 aaKnown RBP13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 SFNP31947 248 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 PRR16Q569H4 304 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 ZNF410Q86VK4 478 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 GPR161Q8N6U8 529 aaKnown RBP13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 GPR152Q8TDT2 470 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 CCDC12Q8WUD4 166 aaPredicted RBP13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 SHDQ96IW2 340 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 TMEM175Q9BSA9 504 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 C6orf50Q9HD87 102 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 NCDNQ9UBB6 729 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 FAN1Q9Y2M0 1017 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 CACNA1IQ9P0X4 2223 aa13.17□□□□□ -0.3
TMEM55A-202ENST00000518359 A0A087WZ62 844 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 C2CD2LO14523 706 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 ZBTB43O43298 467 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 ZNF862O60290 1169 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 LILRB3O75022 631 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 SOD2P04179 222 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 JAK3P52333 1124 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 AK2P54819 239 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 RSPO4Q2I0M5 234 aaPredicted RBP13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 DCLRE1AQ6PJP8 1040 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 CATSPER4Q7RTX7 472 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 DCLK2Q8N568 766 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 SMG7Q92540 1137 aaKnown RBP13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 CNTNAP3BQ96NU0 1288 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 RPS6KC1Q96S38 1066 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 FDXACB1Q9BRP7 624 aaPredicted RBP13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 CNTNAP3Q9BZ76 1288 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 PIDD1Q9HB75 910 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 DLGAP2Q9P1A6 1054 aa13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 SEPT9Q9UHD8 586 aaPredicted RBP13.16□□□□□ -0.3
TMEM55A-202ENST00000518359 CNTNAP2Q9UHC6 1331 aa13.15□□□□□ -0.3
TMEM55A-202ENST00000518359 TPRP12270 2363 aaKnown RBP13.15□□□□□ -0.3
TMEM55A-202ENST00000518359 ESYT2A0FGR8 921 aa13.15□□□□□ -0.3
TMEM55A-202ENST00000518359 MEIS3P2A8K0S8 358 aa13.15□□□□□ -0.3
TMEM55A-202ENST00000518359 SLC27A2O14975 620 aa13.15□□□□□ -0.3
TMEM55A-202ENST00000518359 SPTLC1O15269 473 aa13.15□□□□□ -0.3
TMEM55A-202ENST00000518359 GLUD2P49448 558 aa13.15□□□□□ -0.3
TMEM55A-202ENST00000518359 FUT2Q10981 343 aa13.15□□□□□ -0.3
TMEM55A-202ENST00000518359 MTERF2Q49AM1 385 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms