RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 SLC9A1P19634 815 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 PON1P27169 355 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 PAFAH1B1P43034 410 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 VAMP7P51809 220 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 POLGP54098 1239 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-204ENST00000517824 PPATQ06203 517 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 KCNA1Q09470 495 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 MAPK7Q13164 816 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 BMS1Q14692 1282 aaKnown RBP11.72□□□□□ -0.53
SPIDR-204ENST00000517824 SLC18A3Q16572 532 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 MOB2Q70IA6 237 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 ERO1BQ86YB8 467 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 RNF10Q8N5U6 811 aaKnown RBP11.72□□□□□ -0.53
SPIDR-204ENST00000517824 LRRN4CLQ8ND94 238 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 TAF4BQ92750 862 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 CAPZA3Q96KX2 299 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 C17orf75Q9HAS0 396 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 AIPL1Q9NZN9 384 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 FBXL5Q9UKA1 691 aa11.72□□□□□ -0.53
SPIDR-204ENST00000517824 BRCA2P51587 3418 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 ENC1O14682 589 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 NKRFO15226 690 aaKnown RBP eCLIP11.71□□□□□ -0.53
SPIDR-204ENST00000517824 FANCGO15287 622 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 PJA2O43164 708 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 EIF3JO75822 258 aaKnown RBP11.71□□□□□ -0.53
SPIDR-204ENST00000517824 PPP1R37O75864 691 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 GFPT2O94808 682 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 NOL4O94818 638 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 SLC25A27O95847 323 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.53
SPIDR-204ENST00000517824 SUPT20HL2P0C7V6 817 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 TRIM49P0CI25 452 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 TRIM49CP0CI26 452 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 H2AFXP16104 143 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-204ENST00000517824 KCNA2P16389 499 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 TCP1P17987 556 aaKnown RBP11.71□□□□□ -0.53
SPIDR-204ENST00000517824 SCP2P22307 547 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 ALDH5A1P51649 535 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-204ENST00000517824 NCKAP1LP55160 1127 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 ACTR2P61160 394 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 STRN3Q13033 797 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 GPS2Q13227 327 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 BRD3Q15059 726 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 MTERF2Q49AM1 385 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 MAP9Q49MG5 647 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 WDR78Q5VTH9 848 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 SWSAP1Q6NVH7 229 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 SEPT14Q6ZU15 432 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 RSRC2Q7L4I2 434 aaKnown RBP11.71□□□□□ -0.53
SPIDR-204ENST00000517824 TRAPPC11Q7Z392 1133 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 RIOX2Q8IUF8 465 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 C12orf56Q8IXR9 622 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 PURBQ96QR8 312 aaKnown RBP11.71□□□□□ -0.53
SPIDR-204ENST00000517824 LACRTQ9GZZ8 138 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 POLR3FQ9H1D9 316 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-204ENST00000517824 ACBD3Q9H3P7 528 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 ST6GALNAC4Q9H4F1 302 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 PCIF1Q9H4Z3 704 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 MLXIPQ9HAP2 919 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 ARFGAP3Q9NP61 516 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 ZNF302Q9NR11 478 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 SEPT11Q9NVA2 429 aaKnown RBP11.71□□□□□ -0.53
SPIDR-204ENST00000517824 HSPBP1Q9NZL4 362 aa11.71□□□□□ -0.53
SPIDR-204ENST00000517824 ATP8B3O60423 1300 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 EMSYQ7Z589 1322 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 DENND3A2RUS2 1198 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 SPATA31C2B4DYI2 1134 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 RBAK-RBAKDNI3L0D1 243 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 CXCL11O14625 94 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 HNRNPDLO14979 420 aaKnown RBP11.7□□□□□ -0.54
SPIDR-204ENST00000517824 MAPK13O15264 365 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 P4HA2O15460 535 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 SORBS3O60504 671 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 ATP9AO75110 1047 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 SOX5P35711 763 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 MATR3P43243 847 aaKnown RBP eCLIP11.7□□□□□ -0.542e-8■■■■■ 27.6
SPIDR-204ENST00000517824 NOP2P46087 812 aaKnown RBP11.7□□□□□ -0.54
SPIDR-204ENST00000517824 MXI1P50539 228 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 CLCN6P51797 869 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 NPEPPSP55786 919 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 SOX10P56693 466 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 FKBP1BP68106 108 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 PPIL2Q13356 520 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 KIAA0753Q2KHM9 967 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 XKR3Q5GH77 459 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 TREML2Q5T2D2 321 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.7□□□□□ -0.54
SPIDR-204ENST00000517824 FASTKD5Q7L8L6 764 aaKnown RBP11.7□□□□□ -0.54
SPIDR-204ENST00000517824 DAW1Q8N136 415 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 KRT222Q8N1A0 295 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 RDH13Q8NBN7 331 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 DEPTORQ8TB45 409 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 LMBR1Q8WVP7 490 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 FAM167AQ96KS9 214 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 SPATC1LQ9H0A9 340 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 OGFRQ9NZT2 677 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 APEX2Q9UBZ4 518 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 PNMA3Q9UL41 463 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 TFR2Q9UP52 801 aa11.7□□□□□ -0.54
SPIDR-204ENST00000517824 A0A0G2JLL6 359 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms