RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 RUSC1Q9BVN2 902 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 NSRP1Q9H0G5 558 aaKnown RBP13.35□□□□□ -0.27
PCM1-203ENST00000517545 METTL14Q9HCE5 456 aaKnown RBP13.35□□□□□ -0.27
PCM1-203ENST00000517545 USP40Q9NVE5 1235 aa13.35□□□□□ -0.27
PCM1-203ENST00000517545 CNOT7Q9UIV1 285 aaKnown RBP13.35□□□□□ -0.27
PCM1-203ENST00000517545 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
PCM1-203ENST00000517545 TGFB1I1O43294 461 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 LRRN2O75325 713 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 KCNJ1P48048 391 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 SPIRE1Q08AE8 756 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 COG2Q14746 738 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 ARHGAP44Q17R89 818 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 CBWD6Q4V339 395 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 CBWD3Q5JTY5 395 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 CBWD5Q5RIA9 395 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 LRCH2Q5VUJ6 765 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 CPNE8Q86YQ8 564 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 MARCH10Q8NA82 808 aaPredicted RBP13.34□□□□□ -0.27
PCM1-203ENST00000517545 KLHL29Q96CT2 875 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 BORCS6Q96GS4 357 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 NOP53Q9NZM5 478 aaKnown RBP13.34□□□□□ -0.27
PCM1-203ENST00000517545 DIS3Q9Y2L1 958 aaKnown RBP13.34□□□□□ -0.27
PCM1-203ENST00000517545 GPR75-ASB3A0A0A6YYF3 556 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 HSPA1LP34931 641 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 PICALMQ13492 652 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 ZKSCAN8Q15776 578 aaPredicted RBP13.34□□□□□ -0.27
PCM1-203ENST00000517545 CCDC137Q6PK04 289 aaKnown RBP13.34□□□□□ -0.27
PCM1-203ENST00000517545 ANKRD42Q8N9B4 389 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 SPDL1Q96EA4 605 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 POP1Q99575 1024 aaKnown RBP13.34□□□□□ -0.27
PCM1-203ENST00000517545 STK33Q9BYT3 514 aa13.34□□□□□ -0.27
PCM1-203ENST00000517545 TRIM49P0CI25 452 aa13.33□□□□□ -0.27
PCM1-203ENST00000517545 TRIM49CP0CI26 452 aa13.33□□□□□ -0.27
PCM1-203ENST00000517545 SLURP2P0DP57 97 aa13.33□□□□□ -0.27
PCM1-203ENST00000517545 PPP2R5EQ16537 467 aa13.33□□□□□ -0.27
PCM1-203ENST00000517545 PRR16Q569H4 304 aa13.33□□□□□ -0.27
PCM1-203ENST00000517545 NUGGCQ68CJ6 796 aa13.33□□□□□ -0.27
PCM1-203ENST00000517545 SYT2Q8N9I0 419 aaPredicted RBP13.33□□□□□ -0.27
PCM1-203ENST00000517545 GDAP1Q8TB36 358 aa13.33□□□□□ -0.27
PCM1-203ENST00000517545 CRAMP1Q96RY5 1269 aa13.33□□□□□ -0.27
PCM1-203ENST00000517545 P2RX7Q99572 595 aaKnown RBP13.33□□□□□ -0.27
PCM1-203ENST00000517545 BHMT2Q9H2M3 363 aa13.33□□□□□ -0.27
PCM1-203ENST00000517545 CTNNAL1Q9UBT7 734 aa13.33□□□□□ -0.27
PCM1-203ENST00000517545 MTRF1LQ9UGC7 380 aaKnown RBP13.33□□□□□ -0.27
PCM1-203ENST00000517545 DNM3Q9UQ16 869 aa13.33□□□□□ -0.27
PCM1-203ENST00000517545 PFASO15067 1338 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 TMEM120BA0PK00 339 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 EIF4E1BA6NMX2 242 aaKnown RBP13.33□□□□□ -0.28
PCM1-203ENST00000517545 SLC16A3O15427 465 aaKnown RBP13.33□□□□□ -0.28
PCM1-203ENST00000517545 ACSL3O95573 720 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 GH1P01241 217 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 TNFAIP3P21580 790 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 RPL13P26373 211 aaKnown RBP13.33□□□□□ -0.28
PCM1-203ENST00000517545 BNIP1Q12981 228 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 DDB1Q16531 1140 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 ZC2HC1CQ53FD0 456 aaPredicted RBP13.33□□□□□ -0.28
PCM1-203ENST00000517545 PPP1R18Q6NYC8 613 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 FAM186BQ8IYM0 893 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 FITM2Q8N6M3 262 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 CCHCR1Q8TD31 782 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 TBC1D22AQ8WUA7 517 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 SLC20A1Q8WUM9 679 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 KIF13BQ9NQT8 1826 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 NMT1P30419 496 aaKnown RBP13.33□□□□□ -0.28
PCM1-203ENST00000517545 COPS2P61201 443 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 SATB1Q01826 763 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 SETDB2Q96T68 719 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 ANO3Q9BYT9 981 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 MYO3BQ8WXR4 1341 aa13.33□□□□□ -0.28
PCM1-203ENST00000517545 GTPBP10A4D1E9 387 aaKnown RBP13.32□□□□□ -0.28
PCM1-203ENST00000517545 PPP1R12AO14974 1030 aaPredicted RBP13.32□□□□□ -0.28
PCM1-203ENST00000517545 ZBTB5O15062 677 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 CHRNA3P32297 505 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 FMO5P49326 533 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 VSTM1Q6UX27 236 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 MAEAQ7L5Y9 396 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 TBC1D16Q8TBP0 767 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 ARHGEF2Q92974 986 aaKnown RBP13.32□□□□□ -0.28
PCM1-203ENST00000517545 RMDN2Q96LZ7 410 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 TMEM109Q9BVC6 243 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 MXD3Q9BW11 206 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 ARHGEF10LQ9HCE6 1279 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 DNAJC17Q9NVM6 304 aaKnown RBP13.32□□□□□ -0.28
PCM1-203ENST00000517545 SLC5A4Q9NY91 659 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 CTTNBP2NLQ9P2B4 639 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 PCYOX1Q9UHG3 505 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 ARFGEF1Q9Y6D6 1849 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 RAD21O60216 631 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 RARGP13631 454 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 PDE6BP35913 854 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 MPP2Q14168 576 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 ZNF746Q6NUN9 644 aaPredicted RBP13.32□□□□□ -0.28
PCM1-203ENST00000517545 BTNL9Q6UXG8 535 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 SLC30A10Q6XR72 485 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 TAOK1Q7L7X3 1001 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 CCDC105Q8IYK2 499 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 KCNV2Q8TDN2 545 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 ZMYM2Q9UBW7 1377 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 ANKRD62A6NC57 917 aa13.32□□□□□ -0.28
PCM1-203ENST00000517545 SUN1O94901 812 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms