RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 HTATIP2Q9BUP3 242 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 NFKBIZQ9BYH8 718 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 LRRC27Q9C0I9 530 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 ST6GALNAC4Q9H4F1 302 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 ERVK-5Q9HDB9 667 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 PRDM5Q9NQX1 630 aaPredicted RBP10.92□□□□□ -0.66
CLN8-202ENST00000517514 OLFML3Q9NRN5 406 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 TBC1D7Q9P0N9 293 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 MAN1B1Q9UKM7 699 aa10.92□□□□□ -0.66
CLN8-202ENST00000517514 ZMYND8Q9ULU4 1186 aaPredicted RBP10.92□□□□□ -0.66
CLN8-202ENST00000517514 LRRIQ4A6NIV6 560 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 TRAK2O60296 914 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 TBCAO75347 108 aaKnown RBP10.91□□□□□ -0.66
CLN8-202ENST00000517514 CXCL10P02778 98 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 GHRP10912 638 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 SYN1P17600 705 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 GAP43P17677 238 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 EIF4BP23588 611 aaKnown RBP10.91□□□□□ -0.66
CLN8-202ENST00000517514 EPHB4P54760 987 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 GTF2BQ00403 316 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 MAPK8IP2Q13387 824 aaPredicted RBP10.91□□□□□ -0.66
CLN8-202ENST00000517514 KCNB1Q14721 858 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 KLHL40Q2TBA0 621 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 HERC4Q5GLZ8 1057 aaPredicted RBP10.91□□□□□ -0.66
CLN8-202ENST00000517514 C16orf59Q7L2K0 433 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 ZNF720Q7Z2F6 126 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 RSPH3Q86UC2 560 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 CCDC65Q8IXS2 484 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 NLRP7Q8WX94 980 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 NUP62CLQ9H1M0 184 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 TMX1Q9H3N1 280 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 FZD8Q9H461 694 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 ZHX3Q9H4I2 956 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 C17orf75Q9HAS0 396 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 KMT5AQ9NQR1 393 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 KIAA1468Q9P260 1216 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 SEL1LQ9UBV2 794 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 GINS2Q9Y248 185 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 GDAQ9Y2T3 454 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 SQORQ9Y6N5 450 aa10.91□□□□□ -0.66
CLN8-202ENST00000517514 ZMYM2Q9UBW7 1377 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 CCDC169A6NNP5 214 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 B4GALT5O43286 388 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 EVI5O60447 810 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 MGEA5O60502 916 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 CAPN15O75808 1086 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 RPLP2P05387 115 aaKnown RBP10.9□□□□□ -0.66
CLN8-202ENST00000517514 HOXA11P31270 313 aaPredicted RBP10.9□□□□□ -0.66
CLN8-202ENST00000517514 CD52P31358 61 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 CDC42EP1Q00587 391 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 DMP1Q13316 513 aaPredicted RBP10.9□□□□□ -0.66
CLN8-202ENST00000517514 MORC3Q14149 939 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 DSC3Q14574 896 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 PPP2R5AQ15172 486 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 FAM187BQ17R55 369 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 PLEKHG4Q58EX7 1191 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 FAM26FQ5R3K3 315 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 ISM2Q6H9L7 571 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 MFSD5Q6N075 450 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 HAUS6Q7Z4H7 955 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 SRGAP1Q7Z6B7 1085 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 RTN4RL1Q86UN2 441 aaPredicted RBP10.9□□□□□ -0.66
CLN8-202ENST00000517514 FAM178BQ8IXR5 827 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 ZNF710Q8N1W2 664 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 CCDC155Q8N6L0 562 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 SCFD1Q8WVM8 642 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 LINC01599Q8WXQ3 324 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 BADQ92934 168 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 IFT74Q96LB3 600 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 GSDMAQ96QA5 445 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 GCOM2Q9BZD3 368 aaPredicted RBP10.9□□□□□ -0.66
CLN8-202ENST00000517514 HAPLN2Q9GZV7 340 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 TMEM134Q9H6X4 195 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 SLC39A2Q9NP94 309 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 LARSQ9P2J5 1176 aaKnown RBP10.9□□□□□ -0.66
CLN8-202ENST00000517514 PADI3Q9ULW8 664 aa10.9□□□□□ -0.66
CLN8-202ENST00000517514 DENND3A2RUS2 1198 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 TISP43B9A030 160 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 ABLIM1O14639 778 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 TSPAN1O60635 241 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 PRPF6O94906 941 aaKnown RBP10.89□□□□□ -0.67
CLN8-202ENST00000517514 CSF2RAP15509 400 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 RAG1P15918 1043 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 CD44P16070 742 aaKnown RBP10.89□□□□□ -0.67
CLN8-202ENST00000517514 PHKA2P46019 1235 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 TFDP1Q14186 410 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 EEF1DP3Q658K8 133 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 CAVIN1Q6NZI2 390 aaKnown RBP10.89□□□□□ -0.67
CLN8-202ENST00000517514 SLC39A4Q6P5W5 647 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 TSHZ1Q6ZSZ6 1077 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 SMYD4Q8IYR2 804 aaPredicted RBP10.89□□□□□ -0.67
CLN8-202ENST00000517514 DBF4BQ8NFT6 615 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 DEPTORQ8TB45 409 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 ZNF507Q8TCN5 953 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 DPF3Q92784 378 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 SMARCE1Q969G3 411 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 MRPL44Q9H9J2 332 aaKnown RBP10.89□□□□□ -0.67
CLN8-202ENST00000517514 EXOC1Q9NV70 894 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 TBX20Q9UMR3 447 aa10.89□□□□□ -0.67
CLN8-202ENST00000517514 ST3GAL5Q9UNP4 418 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms