RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 SIP14410 1827 aa16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 GJB5O95377 273 aa16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 PEX3P56589 373 aa16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 IFNLR1Q8IU57 520 aaPredicted RBP16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 DEPTORQ8TB45 409 aa16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 IFT74Q96LB3 600 aa16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 FAM161BQ96MY7 647 aa16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 CDX2Q99626 313 aaPredicted RBP16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 REEP2Q9BRK0 252 aa16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 SCAND2PQ9GZW5 306 aaPredicted RBP16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 NKX2-4Q9H2Z4 354 aa16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 SEMA6BQ9H3T3 888 aa16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 RGS18Q9NS28 235 aa16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 STK17AQ9UEE5 414 aa16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 PIN4Q9Y237 131 aaKnown RBP16.13■□□□□ 0.17
SCARNA21-201ENST00000517026 BDP1A6H8Y1 2624 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 CCDC169A6NNP5 214 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 C9IYK1 514 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 TLL1O43897 1013 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 ARHGEF15O94989 841 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 ZSCAN20P17040 1043 aaPredicted RBP16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 LIG1P18858 919 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 DNAJB2P25686 324 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 HOXA11P31270 313 aaPredicted RBP16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 NAMPTP43490 491 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 NPTX2P47972 431 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 GIT2Q14161 759 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 E2F4Q16254 413 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 AMHR2Q16671 573 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 CDCA2Q69YH5 1023 aaPredicted RBP16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 DHX58Q96C10 678 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 DRC1Q96MC2 740 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 TIPINQ9BVW5 301 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 NFKBIZQ9BYH8 718 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 FAM13BQ9NYF5 915 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 KCND2Q9NZV8 630 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 CHMP5Q9NZZ3 219 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 MSRAQ9UJ68 235 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 USP20Q9Y2K6 914 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 PCDHA11Q9Y5I1 949 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 ADGRA3Q8IWK6 1321 aa16.12■□□□□ 0.17
SCARNA21-201ENST00000517026 LCHNA4D1U4 455 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 MYMKA6NI61 221 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 POLR2DO15514 142 aaKnown RBP16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 B4GALT5O43286 388 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 TSPAN1O60635 241 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 KRT18P05783 430 aaKnown RBP16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 SARSP49591 514 aaKnown RBP16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 FAM189BP81408 668 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 PPP2R5AQ15172 486 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 RAB30Q15771 203 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 ADALQ6DHV7 355 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 SLC24A5Q71RS6 500 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 SV2BQ7L1I2 683 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 DYMQ7RTS9 669 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 ZBTB8OSQ8IWT0 167 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 CRIPAKQ8N1N5 446 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 STAMQ92783 540 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 TIFAQ96CG3 184 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 CPB2Q96IY4 423 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 RAD9AQ99638 391 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 TTYH1Q9H313 450 aaPredicted RBP16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 CHST12Q9NRB3 414 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 C1orf112Q9NSG2 853 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 AGPAT5Q9NUQ2 364 aa16.11■□□□□ 0.17
SCARNA21-201ENST00000517026 ARID2Q68CP9 1835 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 A0A1B0GVL5 298 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 TTLL13PA6NNM8 815 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 SLC16A4O15374 487 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 ERLIN2O94905 339 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 CA3P07451 260 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 PLS3P13797 630 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 CMA1P23946 247 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 GATMP50440 423 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 DMP1Q13316 513 aaPredicted RBP16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 TWF2Q6IBS0 349 aaKnown RBP16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 NPAS4Q8IUM7 802 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 IQUBQ8NA54 791 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 CCDC113Q9H0I3 377 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 C2orf40Q9H1Z8 148 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 FZD8Q9H461 694 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 ZHX3Q9H4I2 956 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 KCNH3Q9ULD8 1083 aa16.1■□□□□ 0.17
SCARNA21-201ENST00000517026 FAM13AO94988 1023 aa16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 EDN1P05305 212 aa16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 PRKCBP05771 671 aa16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 PFKFB1P16118 471 aa16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 ARF4P18085 180 aaPredicted RBP16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 HTRA4P83105 476 aaPredicted RBP16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 LONRF3Q496Y0 759 aa16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 UBXN11Q5T124 520 aa16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 ZNF697Q5TEC3 545 aa16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 FAM43BQ6ZT52 329 aaPredicted RBP16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 SPRED2Q7Z698 418 aa16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 CDR2LQ86X02 465 aaPredicted RBP16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 ECHDC2Q86YB7 292 aa16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 RNF169Q8NCN4 708 aa16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 SPIRE2Q8WWL2 714 aa16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 DDX12PQ92771 950 aa16.09■□□□□ 0.17
SCARNA21-201ENST00000517026 YME1L1Q96TA2 773 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms