RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 VGLL2Q8N8G2 317 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 SLC7A14Q8TBB6 771 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 HASPINQ8TF76 798 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 CPPED1Q9BRF8 314 aaPredicted RBP1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 PDCD2LQ9BRP1 358 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 PHF20Q9BVI0 1012 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 IL17RBQ9NRM6 502 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 FLRT1Q9NZU1 646 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 MAGEL2Q9UJ55 1249 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 DENND2AQ9ULE3 1009 aa1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.53□□□□□ -2.16
SCARNA23-201ENST00000516060 PRAMEF25A6NGN4 478 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 MARCH11A6NNE9 402 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 HOXA3O43365 443 aaPredicted RBP1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 SOD2P04179 222 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 PRKCGP05129 697 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 JUNP05412 331 aaKnown RBP1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 ZSCAN20P17040 1043 aaPredicted RBP1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 TNFRSF1BP20333 461 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 FDXRP22570 491 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 CASP7P55210 303 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 NPEPPSP55786 919 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 RNASE9P60153 205 aaKnown RBP1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 MAP3K12Q12852 859 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 PPP2R5EQ16537 467 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 KRT40Q6A162 431 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 FBXL22Q6P050 247 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 Q6ZNX1 250 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 MAMDC2Q7Z304 686 aaPredicted RBP1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 FBXO33Q7Z6M2 555 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 CLEC14AQ86T13 490 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 PLA2G15Q8NCC3 412 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 SEMA6DQ8NFY4 1073 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 OR6P1Q8NGX9 317 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 TMEM255BQ8WV15 326 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 NKD2Q969F2 451 aaPredicted RBP1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 Q96MF0 132 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 BHMT2Q9H2M3 363 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 EBF3Q9H4W6 596 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 NCDNQ9UBB6 729 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 SAE1Q9UBE0 346 aaPredicted RBP1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 TBC1D30Q9Y2I9 924 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 ATP23Q9Y6H3 246 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 IVNS1ABPQ9Y6Y0 642 aa1.52□□□□□ -2.17
SCARNA23-201ENST00000516060 FAM47E-STBD1D6RA91 191 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 MMEP08473 750 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 KELP23276 732 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 APEX1P27695 318 aaKnown RBP1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 ANTXR2P58335 489 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 TAGLNQ01995 201 aaKnown RBP1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 MAP4K2Q12851 820 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 RESTQ13127 1097 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 DDB1Q16531 1140 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 BMT2Q1RMZ1 405 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 ZNF260Q3ZCT1 412 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 SV2CQ496J9 727 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 AKNAD1Q5T1N1 836 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 SLC9A4Q6AI14 798 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 ARHGAP36Q6ZRI8 547 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 GLB1L3Q8NCI6 653 aaPredicted RBP1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 UROC1Q96N76 676 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 IPPKQ9H8X2 491 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 SMURF1Q9HCE7 757 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 ANLNQ9NQW6 1124 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 RNF181Q9P0P0 153 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 LRP2BPQ9P2M1 347 aa1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 CCDC9Q9Y3X0 531 aaKnown RBP1.51□□□□□ -2.17
SCARNA23-201ENST00000516060 AOX1Q06278 1338 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 PRAMEF22A3QJZ6 481 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 FAM221BA6H8Z2 402 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 B4E1Z4 1266 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 DIRC3C9JPN6 131 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 PPEF2O14830 753 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 DNAJC6O75061 913 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 AMY2AP04746 511 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 HLA-DOAP06340 250 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 AMY2BP19961 511 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 GRIA2P42262 883 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 LINC00205P59089 165 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 MRPS35P82673 323 aaKnown RBP1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 NHLH2Q02577 135 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 ADCY1Q08828 1119 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 NCAPHQ15003 741 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 SEC23AQ15436 765 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 GPR19Q15760 415 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 PDCD4Q53EL6 469 aaKnown RBP1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 FIGNQ5HY92 759 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 MORN5Q5VZ52 161 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 KCNT2Q6UVM3 1135 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 USP53Q70EK8 1073 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 GPR149Q86SP6 731 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 FAM83AQ86UY5 434 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 PTRH1Q86Y79 214 aaKnown RBP1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 SYT12Q8IV01 421 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 ASB15Q8WXK1 588 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 KCTD13Q8WZ19 329 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 MARK4Q96L34 752 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 TIMP4Q99727 224 aa1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 LSM14BQ9BX40 385 aaKnown RBP1.5□□□□□ -2.17
SCARNA23-201ENST00000516060 ENKD1Q9H0I2 346 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms