RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
PDCD6-211ENST00000515587 FAM160A1Q05DH4 1040 aa16.66■□□□□ 0.26
PDCD6-211ENST00000515587 GIT2Q14161 759 aa16.66■□□□□ 0.26
PDCD6-211ENST00000515587 LONRF3Q496Y0 759 aa16.66■□□□□ 0.26
PDCD6-211ENST00000515587 KANK3Q6NY19 840 aa16.66■□□□□ 0.26
PDCD6-211ENST00000515587 CNKSR3Q6P9H4 555 aa16.66■□□□□ 0.26
PDCD6-211ENST00000515587 FAM43BQ6ZT52 329 aaPredicted RBP16.66■□□□□ 0.26
PDCD6-211ENST00000515587 DYMQ7RTS9 669 aa16.66■□□□□ 0.26
PDCD6-211ENST00000515587 CNNM3Q8NE01 707 aa16.66■□□□□ 0.26
PDCD6-211ENST00000515587 APBB2Q92870 758 aa16.66■□□□□ 0.26
PDCD6-211ENST00000515587 IFIH1Q9BYX4 1025 aaKnown RBP16.66■□□□□ 0.26
PDCD6-211ENST00000515587 PARVGQ9HBI0 331 aa16.66■□□□□ 0.26
PDCD6-211ENST00000515587 POLD4Q9HCU8 107 aa16.66■□□□□ 0.26
PDCD6-211ENST00000515587 TET1Q8NFU7 2136 aa16.66■□□□□ 0.26
PDCD6-211ENST00000515587 MYMKA6NI61 221 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 CCDC169A6NNP5 214 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 ACTN4O43707 911 aaKnown RBP16.65■□□□□ 0.26
PDCD6-211ENST00000515587 GADD45BO75293 160 aaPredicted RBP16.65■□□□□ 0.26
PDCD6-211ENST00000515587 FGBP02675 491 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 ACRP10323 421 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 PLS3P13797 630 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 IDEP14735 1019 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 CD52P31358 61 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 AFMP43652 599 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 NFX1Q12986 1120 aaKnown RBP16.65■□□□□ 0.26
PDCD6-211ENST00000515587 MAPK7Q13164 816 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 PLEKHG4Q58EX7 1191 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 CCDC65Q8IXS2 484 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 FMR1NBQ8N0W7 255 aaPredicted RBP16.65■□□□□ 0.26
PDCD6-211ENST00000515587 DAW1Q8N136 415 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 MYCT1Q8N699 235 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 STAMQ92783 540 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 MTIF3Q9H2K0 278 aaKnown RBP16.65■□□□□ 0.26
PDCD6-211ENST00000515587 KMT5AQ9NQR1 393 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 HOOK1Q9UJC3 728 aaKnown RBP16.65■□□□□ 0.26
PDCD6-211ENST00000515587 NOC2LQ9Y3T9 749 aaKnown RBP16.65■□□□□ 0.26
PDCD6-211ENST00000515587 PHLPP2Q6ZVD8 1323 aa16.65■□□□□ 0.26
PDCD6-211ENST00000515587 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.64■□□□□ 0.25
PDCD6-211ENST00000515587 SFI1A8K8P3 1242 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 H0YCG3 227 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 INO80B-WBP1J3KQ70 363 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 KINO60870 393 aaKnown RBP16.64■□□□□ 0.25
PDCD6-211ENST00000515587 MYL1P05976 194 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 GAP43P17677 238 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 EFNA5P52803 228 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 PTENP60484 403 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 ASIC1P78348 528 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 SMAD3P84022 425 aaKnown RBP16.64■□□□□ 0.25
PDCD6-211ENST00000515587 NCBP1Q09161 790 aaKnown RBP16.64■□□□□ 0.25
PDCD6-211ENST00000515587 IKBKEQ14164 716 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 PCBP1Q15365 356 aaKnown RBP eCLIP16.64■□□□□ 0.25
PDCD6-211ENST00000515587 KRBA2Q6ZNG9 492 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 CATSPER4Q7RTX7 472 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 TMEM40Q8WWA1 233 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 BSNDQ8WZ55 320 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 C7orf25Q9BPX7 421 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 FTHL17Q9BXU8 183 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 NFKBIZQ9BYH8 718 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 IFT122Q9HBG6 1241 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 PADI3Q9ULW8 664 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 ST3GAL5Q9UNP4 418 aa16.64■□□□□ 0.25
PDCD6-211ENST00000515587 EFCAB14O75071 495 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 ERLIN2O94905 339 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 SCP2P22307 547 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 NPTX2P47972 431 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 GPNMBQ14956 572 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 CDCA2Q69YH5 1023 aaPredicted RBP16.63■□□□□ 0.25
PDCD6-211ENST00000515587 ZNF365Q70YC5 407 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 FAM228AQ86W67 206 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 IFNLR1Q8IU57 520 aaPredicted RBP16.63■□□□□ 0.25
PDCD6-211ENST00000515587 DBF4BQ8NFT6 615 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 SPIRE2Q8WWL2 714 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 DNAJC19Q96DA6 116 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 PAGE5Q96GU1 130 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 TRIM9Q9C026 710 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 AGO3Q9H9G7 860 aaKnown RBP16.63■□□□□ 0.25
PDCD6-211ENST00000515587 ERVK-5Q9HDB9 667 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 PANK4Q9NVE7 773 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 SEL1LQ9UBV2 794 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 MICAL3Q7RTP6 2002 aa16.63■□□□□ 0.25
PDCD6-211ENST00000515587 GTPBP6O43824 516 aaPredicted RBP16.62■□□□□ 0.25
PDCD6-211ENST00000515587 BAIAP3O94812 1187 aa16.62■□□□□ 0.25
PDCD6-211ENST00000515587 ZSCAN20P17040 1043 aaPredicted RBP16.62■□□□□ 0.25
PDCD6-211ENST00000515587 LIG1P18858 919 aa16.62■□□□□ 0.25
PDCD6-211ENST00000515587 ABCD1P33897 745 aa16.62■□□□□ 0.25
PDCD6-211ENST00000515587 ZNF131P52739 623 aa16.62■□□□□ 0.25
PDCD6-211ENST00000515587 GRIN2CQ14957 1233 aa16.62■□□□□ 0.25
PDCD6-211ENST00000515587 MAPK6Q16659 721 aa16.62■□□□□ 0.25
PDCD6-211ENST00000515587 HERC4Q5GLZ8 1057 aaPredicted RBP16.62■□□□□ 0.25
PDCD6-211ENST00000515587 TMEM240Q5SV17 173 aa16.62■□□□□ 0.25
PDCD6-211ENST00000515587 CNNM4Q6P4Q7 775 aa16.62■□□□□ 0.25
PDCD6-211ENST00000515587 OTOP2Q7RTS6 562 aa16.62■□□□□ 0.25
PDCD6-211ENST00000515587 FAM178BQ8IXR5 827 aa16.62■□□□□ 0.25
PDCD6-211ENST00000515587 ENGASEQ8NFI3 743 aa16.62■□□□□ 0.25
PDCD6-211ENST00000515587 CCDC47Q96A33 483 aaKnown RBP16.62■□□□□ 0.25
PDCD6-211ENST00000515587 TIGD1Q96MW7 591 aa16.62■□□□□ 0.25
PDCD6-211ENST00000515587 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.62■□□□□ 0.25
PDCD6-211ENST00000515587 PRMT7Q9NVM4 692 aaPredicted RBP16.62■□□□□ 0.25
PDCD6-211ENST00000515587 ABHD14A-ACY1A0A1B0GW23 586 aa16.61■□□□□ 0.25
PDCD6-211ENST00000515587 DENND3A2RUS2 1198 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms