RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 IFT74Q96LB3 600 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 CLIC6Q96NY7 704 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 TGS1Q96RS0 853 aaKnown RBP13.73□□□□□ -0.21
COPB2-212ENST00000514508 C2orf40Q9H1Z8 148 aa13.73□□□□□ -0.21
COPB2-212ENST00000514508 PIN4Q9Y237 131 aaKnown RBP13.73□□□□□ -0.21
COPB2-212ENST00000514508 EOMESO95936 686 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 SSBP05455 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
COPB2-212ENST00000514508 SKIP12755 728 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 PLCG1P19174 1290 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 IBSPP21815 317 aaPredicted RBP13.72□□□□□ -0.21
COPB2-212ENST00000514508 GUCY2CP25092 1073 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 AXLP30530 894 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 RAB27AP51159 221 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 SLC12A3P55017 1021 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 ERVK-21P61565 698 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 MBTD1Q05BQ5 628 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 BTG3Q14201 252 aaPredicted RBP13.72□□□□□ -0.21
COPB2-212ENST00000514508 FOXD4L6Q3SYB3 417 aaPredicted RBP13.72□□□□□ -0.21
COPB2-212ENST00000514508 SPECC1Q5M775 1068 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 CDCA2Q69YH5 1023 aaPredicted RBP13.72□□□□□ -0.21
COPB2-212ENST00000514508 FOXD4L3Q6VB84 417 aaPredicted RBP13.72□□□□□ -0.21
COPB2-212ENST00000514508 USP49Q70CQ1 688 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 ECHDC2Q86YB7 292 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 CMTR2Q8IYT2 770 aaKnown RBP13.72□□□□□ -0.21
COPB2-212ENST00000514508 FIBCD1Q8N539 461 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 BSNDQ8WZ55 320 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 SYMPKQ92797 1274 aaKnown RBP13.72□□□□□ -0.21
COPB2-212ENST00000514508 DRC1Q96MC2 740 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 SAMD11Q96NU1 681 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 RUSC1Q9BVN2 902 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 PRDM12Q9H4Q4 367 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 C17orf75Q9HAS0 396 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 BLOC1S4Q9NUP1 217 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 DAXXQ9UER7 740 aaPredicted RBP13.72□□□□□ -0.21
COPB2-212ENST00000514508 KCNG1Q9UIX4 513 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 STXBP5LQ9Y2K9 1186 aa13.72□□□□□ -0.21
COPB2-212ENST00000514508 TCHHQ07283 1943 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 HOXA2O43364 376 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 TSPAN1O60635 241 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 DDIT3P35638 169 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.21
COPB2-212ENST00000514508 DEPTORQ8TB45 409 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 KCNG4Q8TDN1 519 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 MYLIPQ8WY64 445 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 ARNTL2Q8WYA1 636 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 RAD54LQ92698 747 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 CCDC51Q96ER9 411 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 PRIMPOLQ96LW4 560 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 GAS2L1Q99501 681 aaPredicted RBP13.71□□□□□ -0.21
COPB2-212ENST00000514508 CERS4Q9HA82 394 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 FAM105AQ9NUU6 356 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 PRMT7Q9NVM4 692 aaPredicted RBP13.71□□□□□ -0.21
COPB2-212ENST00000514508 STK17AQ9UEE5 414 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 ZDHHC9Q9Y397 364 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 RWDD3Q9Y3V2 267 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 ATP6V1DQ9Y5K8 247 aa13.71□□□□□ -0.21
COPB2-212ENST00000514508 CUTAO60888 179 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 ZNF623O75123 536 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 HIP1RO75146 1068 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 FOSL2P15408 326 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 HOXA11P31270 313 aaPredicted RBP13.7□□□□□ -0.22
COPB2-212ENST00000514508 EFNA5P52803 228 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 DNM1Q05193 864 aaKnown RBP13.7□□□□□ -0.22
COPB2-212ENST00000514508 DMP1Q13316 513 aaPredicted RBP13.7□□□□□ -0.22
COPB2-212ENST00000514508 MAPK6Q16659 721 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 AMHR2Q16671 573 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 FAM187BQ17R55 369 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 NOTUMQ6P988 496 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 PPP4R3CPQ6ZMV5 832 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 CCDC73Q6ZRK6 1079 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 ZNF598Q86UK7 904 aaKnown RBP13.7□□□□□ -0.22
COPB2-212ENST00000514508 DAW1Q8N136 415 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 LARP4BQ92615 738 aaKnown RBP13.7□□□□□ -0.22
COPB2-212ENST00000514508 TMEM117Q9H0C3 514 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 FZD8Q9H461 694 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 POLD4Q9HCU8 107 aa13.7□□□□□ -0.22
COPB2-212ENST00000514508 KIAA1671Q9BY89 1806 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 PHLPP2Q6ZVD8 1323 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 ARF4P18085 180 aaPredicted RBP13.69□□□□□ -0.22
COPB2-212ENST00000514508 HOXD11P31277 338 aaPredicted RBP13.69□□□□□ -0.22
COPB2-212ENST00000514508 GATMP50440 423 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 PEX3P56589 373 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 MAPK7Q13164 816 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 DHX8Q14562 1220 aaKnown RBP13.69□□□□□ -0.22
COPB2-212ENST00000514508 MCM6Q14566 821 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 PAN2Q504Q3 1202 aaKnown RBP13.69□□□□□ -0.22
COPB2-212ENST00000514508 RRAGBQ5VZM2 374 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 SPRED2Q7Z698 418 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 GPBP1Q86WP2 473 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 TMEM192Q8IY95 271 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 ABI1Q8IZP0 508 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 RNF169Q8NCN4 708 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 CNNM3Q8NE01 707 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 LRRC15Q8TF66 581 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 RSPH1Q8WYR4 309 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 CLP1Q92989 425 aaKnown RBP13.69□□□□□ -0.22
COPB2-212ENST00000514508 PGBD4Q96DM1 585 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 C17orf80Q9BSJ5 609 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 RCOR1Q9UKL0 485 aa13.69□□□□□ -0.22
COPB2-212ENST00000514508 MTUS1Q9ULD2 1270 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms