RNA–Protein interactions for RNA: ENST00000514428.1

RERE-218, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-218ENST00000514428 CKAP2LQ8IYA6 745 aa3.3□□□□□ -1.88
RERE-218ENST00000514428 ELOA2Q8IYF1 753 aaPredicted RBP3.3□□□□□ -1.88
RERE-218ENST00000514428 C2orf69Q8N8R5 385 aa3.3□□□□□ -1.88
RERE-218ENST00000514428 CAVIN3Q969G5 261 aa3.3□□□□□ -1.88
RERE-218ENST00000514428 UIMC1Q96RL1 719 aa3.3□□□□□ -1.88
RERE-218ENST00000514428 DHRS4Q9BTZ2 278 aa3.3□□□□□ -1.88
RERE-218ENST00000514428 MLST8Q9BVC4 326 aa3.3□□□□□ -1.88
RERE-218ENST00000514428 SPATA5L1Q9BVQ7 753 aa3.3□□□□□ -1.88
RERE-218ENST00000514428 KCNH6Q9H252 994 aa3.3□□□□□ -1.88
RERE-218ENST00000514428 SFMBT1Q9UHJ3 866 aa3.3□□□□□ -1.88
RERE-218ENST00000514428 TMEM200CA6NKL6 621 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 GRXCR1A8MXD5 290 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 PDPK1O15530 556 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 KLF4O43474 513 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 ZNF37AP17032 561 aaPredicted RBP3.29□□□□□ -1.88
RERE-218ENST00000514428 ZEB1P37275 1124 aaPredicted RBP3.29□□□□□ -1.88
RERE-218ENST00000514428 MTERF2Q49AM1 385 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 PRR16Q569H4 304 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 FOXB2Q5VYV0 432 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 TIGD7Q6NT04 549 aaPredicted RBP3.29□□□□□ -1.88
RERE-218ENST00000514428 DOK3Q7L591 496 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 RTN4RL1Q86UN2 441 aaPredicted RBP3.29□□□□□ -1.88
RERE-218ENST00000514428 ZZZ3Q8IYH5 903 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 CELF2-AS1Q8N7Q2 184 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 SMG7Q92540 1137 aaKnown RBP3.29□□□□□ -1.88
RERE-218ENST00000514428 HAPLN2Q9GZV7 340 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 CCDC113Q9H0I3 377 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 EPC1Q9H2F5 836 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 SERHL2Q9H4I8 314 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 SYNPO2LQ9H987 977 aa3.29□□□□□ -1.88
RERE-218ENST00000514428 C6orf222P0C671 652 aaPredicted RBP3.28□□□□□ -1.88
RERE-218ENST00000514428 SLC6A3Q01959 620 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 SSRP1Q08945 709 aaKnown RBP3.28□□□□□ -1.88
RERE-218ENST00000514428 MAPK7Q13164 816 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 ZNF174Q15697 407 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 VPS72Q15906 364 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 CATSPEREQ5SY80 951 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 YOD1Q5VVQ6 348 aaPredicted RBP3.28□□□□□ -1.88
RERE-218ENST00000514428 C1QL3Q5VWW1 255 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 KIAA1614Q5VZ46 1190 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 FBXO42Q6P3S6 717 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 OTOP1Q7RTM1 612 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 GDF7Q7Z4P5 450 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 GLCCI1Q86VQ1 547 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 CISD2Q8N5K1 135 aaKnown RBP3.28□□□□□ -1.88
RERE-218ENST00000514428 BEND2Q8NDZ0 799 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 ERCC4Q92889 916 aaPredicted RBP3.28□□□□□ -1.88
RERE-218ENST00000514428 PGBD4Q96DM1 585 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 HIST1H2AHQ96KK5 128 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 HIST1H2AJQ99878 128 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 CPPED1Q9BRF8 314 aaPredicted RBP3.28□□□□□ -1.88
RERE-218ENST00000514428 NDC1Q9BTX1 674 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 PCIF1Q9H4Z3 704 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 KMT5AQ9NQR1 393 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 NCDNQ9UBB6 729 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 PCDHA9Q9Y5H5 950 aa3.28□□□□□ -1.88
RERE-218ENST00000514428 DNAJC6O75061 913 aa3.27□□□□□ -1.89
RERE-218ENST00000514428 HSP90B1P14625 803 aaKnown RBP3.27□□□□□ -1.89
RERE-218ENST00000514428 CXCR5P32302 372 aa3.27□□□□□ -1.89
RERE-218ENST00000514428 STAT3P40763 770 aa3.27□□□□□ -1.89
RERE-218ENST00000514428 GUCY1B3Q02153 619 aa3.27□□□□□ -1.89
RERE-218ENST00000514428 EPHA7Q15375 998 aa3.27□□□□□ -1.89
RERE-218ENST00000514428 TRIM61Q5EBN2 209 aa3.27□□□□□ -1.89
RERE-218ENST00000514428 PAPD7Q5XG87 772 aaKnown RBP3.27□□□□□ -1.89
RERE-218ENST00000514428 OVCH1Q7RTY7 1134 aa3.27□□□□□ -1.89
RERE-218ENST00000514428 LRP10Q7Z4F1 713 aa3.27□□□□□ -1.89
RERE-218ENST00000514428 DDX53Q86TM3 631 aaKnown RBP3.27□□□□□ -1.89
RERE-218ENST00000514428 UNC5BQ8IZJ1 945 aa3.27□□□□□ -1.89
RERE-218ENST00000514428 NTN5Q8WTR8 489 aaPredicted RBP3.27□□□□□ -1.89
RERE-218ENST00000514428 LINC00476Q8WZB0 136 aa3.27□□□□□ -1.89
RERE-218ENST00000514428 FOXRED1Q96CU9 486 aaPredicted RBP3.27□□□□□ -1.89
RERE-218ENST00000514428 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.27□□□□□ -1.89
RERE-218ENST00000514428 MSRB2Q9Y3D2 182 aa3.27□□□□□ -1.89
RERE-218ENST00000514428 MRPS23Q9Y3D9 190 aaKnown RBP3.27□□□□□ -1.89
RERE-218ENST00000514428 CENPVL1A0A0U1RR11 272 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 PIPSLA2A3N6 862 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 RASSF10A6NK89 507 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 PRR5-ARHGAP8B1AHC4 643 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 H7C1D1 291 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 KCNK3O14649 394 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 IKBKBO14920 756 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 HOXA3O43365 443 aaPredicted RBP3.26□□□□□ -1.89
RERE-218ENST00000514428 ADCY3O60266 1144 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 NRP2O60462 931 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 DIAPH1O60610 1272 aaKnown RBP3.26□□□□□ -1.89
RERE-218ENST00000514428 NR4A1P22736 598 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 RANGAP1P46060 587 aaPredicted RBP3.26□□□□□ -1.89
RERE-218ENST00000514428 NHLH1Q02575 133 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 SEC23AQ15436 765 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 CCDC178Q5BJE1 867 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 PRAMEF9Q5VWM5 478 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 CCDC62Q6P9F0 684 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 DRICH1Q6PGQ1 229 aaPredicted RBP3.26□□□□□ -1.89
RERE-218ENST00000514428 PHYKPLQ8IUZ5 450 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 GSTCDQ8NEC7 633 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 OR52N2Q8NGI0 321 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 TUBGCP5Q96RT8 1024 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 DUSP26Q9BV47 211 aa3.26□□□□□ -1.89
RERE-218ENST00000514428 MRPL4Q9BYD3 311 aaKnown RBP3.26□□□□□ -1.89
RERE-218ENST00000514428 RSAD1Q9HA92 442 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms