RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 GCOM2Q9BZD3 368 aaPredicted RBP12.51□□□□□ -0.41
HTT-213ENST00000513806 INO80BQ9C086 356 aaPredicted RBP12.51□□□□□ -0.41
HTT-213ENST00000513806 TMX1Q9H3N1 280 aa12.51□□□□□ -0.41
HTT-213ENST00000513806 PARVGQ9HBI0 331 aa12.51□□□□□ -0.41
HTT-213ENST00000513806 ERVK-5Q9HDB9 667 aa12.51□□□□□ -0.41
HTT-213ENST00000513806 KCND2Q9NZV8 630 aa12.51□□□□□ -0.41
HTT-213ENST00000513806 USP25Q9UHP3 1055 aa12.51□□□□□ -0.41
HTT-213ENST00000513806 ODF2LQ9ULJ1 636 aa12.51□□□□□ -0.41
HTT-213ENST00000513806 PADI3Q9ULW8 664 aa12.51□□□□□ -0.41
HTT-213ENST00000513806 ST3GAL5Q9UNP4 418 aa12.51□□□□□ -0.41
HTT-213ENST00000513806 FRMD3A2A2Y4 597 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 K7ENM7 598 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 ASAP2O43150 1006 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 CXCL10P02778 98 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 EIF4BP23588 611 aaKnown RBP12.5□□□□□ -0.41
HTT-213ENST00000513806 NAMPTP43490 491 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 PHKA2P46019 1235 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 AMPD3Q01432 767 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 KCNA1Q09470 495 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 PAK2Q13177 524 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 DMP1Q13316 513 aaPredicted RBP12.5□□□□□ -0.41
HTT-213ENST00000513806 TFDP1Q14186 410 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 KMT5BQ4FZB7 885 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 PLEKHG4Q58EX7 1191 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 HERC4Q5GLZ8 1057 aaPredicted RBP12.5□□□□□ -0.41
HTT-213ENST00000513806 C9orf50Q5SZB4 431 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 CDCA2Q69YH5 1023 aaPredicted RBP12.5□□□□□ -0.41
HTT-213ENST00000513806 TSHZ1Q6ZSZ6 1077 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 OTOP2Q7RTS6 562 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 CATSPER4Q7RTX7 472 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 TMCO2Q7Z6W1 182 aaPredicted RBP12.5□□□□□ -0.41
HTT-213ENST00000513806 ZNF410Q86VK4 478 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.412e-8■■■□□ 15.9
HTT-213ENST00000513806 TIPINQ9BVW5 301 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 IFIH1Q9BYX4 1025 aaKnown RBP12.5□□□□□ -0.41
HTT-213ENST00000513806 CCDC113Q9H0I3 377 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 MAGEF1Q9HAY2 307 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 IL23AQ9NPF7 189 aa12.5□□□□□ -0.41
HTT-213ENST00000513806 DENND3A2RUS2 1198 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 TRAK2O60296 914 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 PRPF6O94906 941 aaKnown RBP12.49□□□□□ -0.41
HTT-213ENST00000513806 RPN1P04843 607 aaKnown RBP12.49□□□□□ -0.41
HTT-213ENST00000513806 PRKCBP05771 671 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 NCKAP1LP55160 1127 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 AMHR2Q16671 573 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 TMEM240Q5SV17 173 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
HTT-213ENST00000513806 UNC13DQ70J99 1090 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 ZNF365Q70YC5 407 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 RTN4RL1Q86UN2 441 aaPredicted RBP12.49□□□□□ -0.41
HTT-213ENST00000513806 FAM178BQ8IXR5 827 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 CCDC65Q8IXS2 484 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 TMEM161BQ8NDZ6 487 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 MRPL44Q9H9J2 332 aaKnown RBP12.49□□□□□ -0.41
HTT-213ENST00000513806 SLC39A2Q9NP94 309 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 ARHGAP28Q9P2N2 729 aa12.49□□□□□ -0.41
HTT-213ENST00000513806 TISP43B9A030 160 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 BIN1O00499 593 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 TSPAN1O60635 241 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 GCNT3O95395 438 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 MAPTP10636 758 aaKnown RBP12.48□□□□□ -0.41
HTT-213ENST00000513806 STK4Q13043 487 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 PPIGQ13427 754 aaKnown RBP eCLIP12.48□□□□□ -0.416e-8■□□□□ 9.6
HTT-213ENST00000513806 PPP2R5AQ15172 486 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 NT5DC1Q5TFE4 455 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 EEF1DP3Q658K8 133 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 HAUS6Q7Z4H7 955 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 SRGAP1Q7Z6B7 1085 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 ZBTB8OSQ8IWT0 167 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 SMYD4Q8IYR2 804 aaPredicted RBP12.48□□□□□ -0.41
HTT-213ENST00000513806 SPIRE2Q8WWL2 714 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 SEPT8Q92599 483 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 ZBTB45Q96K62 511 aaPredicted RBP12.48□□□□□ -0.41
HTT-213ENST00000513806 TIGD1Q96MW7 591 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 LRRC27Q9C0I9 530 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 CLSTN2Q9H4D0 955 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 CXXC1Q9P0U4 656 aaPredicted RBP12.48□□□□□ -0.41
HTT-213ENST00000513806 LARSQ9P2J5 1176 aaKnown RBP12.48□□□□□ -0.41
HTT-213ENST00000513806 PIN4Q9Y237 131 aaKnown RBP12.48□□□□□ -0.41
HTT-213ENST00000513806 GDAQ9Y2T3 454 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 PCDHA5Q9Y5H7 936 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 TTC3P53804 2025 aa12.48□□□□□ -0.41
HTT-213ENST00000513806 FNDC1Q4ZHG4 1894 aaPredicted RBP12.48□□□□□ -0.41
HTT-213ENST00000513806 CITO14578 2027 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 ANK1P16157 1881 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.47□□□□□ -0.41
HTT-213ENST00000513806 ZBBXA8MT70 800 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 K7ERI5 159 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 RPLP2P05387 115 aaKnown RBP12.47□□□□□ -0.41
HTT-213ENST00000513806 GAP43P17677 238 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 ARF4P18085 180 aaPredicted RBP12.47□□□□□ -0.41
HTT-213ENST00000513806 RFC2P35250 354 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 DEFB103AP81534 67 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 EHHADHQ08426 723 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 SHHQ15465 462 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 NFKBIBQ15653 356 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 FAM26FQ5R3K3 315 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 CNNM4Q6P4Q7 775 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 CNKSR3Q6P9H4 555 aa12.47□□□□□ -0.41
HTT-213ENST00000513806 CHRDL2Q6WN34 429 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms