RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 CSDE1O75534 798 aaKnown RBP12.37□□□□□ -0.43
DDX41-216ENST00000513562 OFD1O75665 1012 aa12.37□□□□□ -0.43
DDX41-216ENST00000513562 PAPLNO95428 1278 aa12.37□□□□□ -0.43
DDX41-216ENST00000513562 CYP3A4P08684 503 aa12.37□□□□□ -0.43
DDX41-216ENST00000513562 SKIP12755 728 aa12.37□□□□□ -0.43
DDX41-216ENST00000513562 SETQ01105 290 aaPredicted RBP12.37□□□□□ -0.43
DDX41-216ENST00000513562 RNASELQ05823 741 aaKnown RBP12.37□□□□□ -0.43
DDX41-216ENST00000513562 TTC22Q5TAA0 569 aa12.37□□□□□ -0.43
DDX41-216ENST00000513562 SGMS1Q86VZ5 419 aa12.37□□□□□ -0.43
DDX41-216ENST00000513562 MICU3Q86XE3 530 aa12.37□□□□□ -0.43
DDX41-216ENST00000513562 MAML2Q8IZL2 1156 aaPredicted RBP12.37□□□□□ -0.43
DDX41-216ENST00000513562 ZNF713Q8N859 430 aaPredicted RBP12.37□□□□□ -0.43
DDX41-216ENST00000513562 MYADMQ96S97 322 aa12.37□□□□□ -0.43
DDX41-216ENST00000513562 GLT8D2Q9H1C3 349 aa12.37□□□□□ -0.43
DDX41-216ENST00000513562 MRPL17Q9NRX2 175 aaKnown RBP12.37□□□□□ -0.43
DDX41-216ENST00000513562 INPP5FQ9Y2H2 1132 aa12.37□□□□□ -0.43
DDX41-216ENST00000513562 RBM8AQ9Y5S9 174 aaKnown RBP12.37□□□□□ -0.43
DDX41-216ENST00000513562 OTOGLQ3ZCN5 2332 aa12.37□□□□□ -0.43
DDX41-216ENST00000513562 CACNA1BQ00975 2339 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 CCDC195A0A1B0GUA6 201 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 POTEMA6NI47 508 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 WDR64B1ANS9 1081 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 INPPL1O15357 1258 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 ZNF623O75123 536 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 SSBP05455 408 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX41-216ENST00000513562 GLULP15104 373 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 SDHBP21912 280 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 SFPQP23246 707 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX41-216ENST00000513562 PRKCEQ02156 737 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 FUT2Q10981 343 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 DRP2Q13474 957 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 LONRF3Q496Y0 759 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 TWF2Q6IBS0 349 aaKnown RBP12.36□□□□□ -0.43
DDX41-216ENST00000513562 POTEGQ6S5H5 508 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 ZNF280BQ86YH2 543 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 PJA1Q8NG27 643 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 BORCS6Q96GS4 357 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 GCOM2Q9BZD3 368 aaPredicted RBP12.36□□□□□ -0.43
DDX41-216ENST00000513562 GBP3Q9H0R5 595 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 SLC2A4RGQ9NR83 387 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 FAM105AQ9NUU6 356 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 BARHL2Q9NY43 387 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 DPP7Q9UHL4 492 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 TCEAL9Q9UHQ7 104 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 MYO10Q9HD67 2058 aa12.36□□□□□ -0.43
DDX41-216ENST00000513562 CEP250Q9BV73 2442 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 ANHXE9PGG2 379 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 SPTLC1O15269 473 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 ADH1AP07327 375 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 RAB27AP51159 221 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 CDC42EP1Q00587 391 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 HTR4Q13639 388 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 TARBP2Q15633 366 aaKnown RBP12.35□□□□□ -0.43
DDX41-216ENST00000513562 ZNF528Q3MIS6 628 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 ELMSAN1Q6PJG2 1045 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 DCLRE1AQ6PJP8 1040 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 ZNF707Q96C28 371 aaPredicted RBP12.35□□□□□ -0.43
DDX41-216ENST00000513562 RPS6KC1Q96S38 1066 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 TMEM175Q9BSA9 504 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 FOXQ1Q9C009 403 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 NRBP2Q9NSY0 501 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 RBM28Q9NW13 759 aaKnown RBP12.35□□□□□ -0.43
DDX41-216ENST00000513562 PIN4Q9Y237 131 aaKnown RBP12.35□□□□□ -0.43
DDX41-216ENST00000513562 SAMM50Q9Y512 469 aa12.35□□□□□ -0.43
DDX41-216ENST00000513562 TEX28O15482 410 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 RFPL2O75678 378 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 DDHD2O94830 711 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 GLUD1P00367 558 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 SOD2P04179 222 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 URODP06132 367 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 LAMP2P13473 410 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 ATXN1P54253 815 aaKnown RBP12.34□□□□□ -0.43
DDX41-216ENST00000513562 STARD6P59095 220 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 UGCGQ16739 394 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 VARS2Q5ST30 1063 aaKnown RBP12.34□□□□□ -0.43
DDX41-216ENST00000513562 JAKMIP3Q5VZ66 844 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 AGMOQ6ZNB7 445 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 GPR161Q8N6U8 529 aaKnown RBP12.34□□□□□ -0.43
DDX41-216ENST00000513562 URGCPQ8TCY9 931 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 SMG7Q92540 1137 aaKnown RBP12.34□□□□□ -0.43
DDX41-216ENST00000513562 LENG9Q96B70 501 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 PGBD4Q96DM1 585 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 HERC2P3Q9BVR0 1158 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 LRRC2Q9BYS8 371 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 RXFP1Q9HBX9 757 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 MARCH5Q9NX47 278 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.34□□□□□ -0.43
DDX41-216ENST00000513562 NCDNQ9UBB6 729 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 FBXO4Q9UKT5 387 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 SSX2IPQ9Y2D8 614 aa12.34□□□□□ -0.43
DDX41-216ENST00000513562 V9GY48 417 aaPredicted RBP12.34□□□□□ -0.43
DDX41-216ENST00000513562 A0A087WZ62 844 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 IGKV6-21A0A0C4DH24 114 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 C2CD2LO14523 706 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 LRRN2O75325 713 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 EFEMP2O95967 443 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 ALDH2P05091 517 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 AFF1P51825 1210 aaKnown RBP12.33□□□□□ -0.44
DDX41-216ENST00000513562 AK2P54819 239 aa12.33□□□□□ -0.44
DDX41-216ENST00000513562 PRR16Q569H4 304 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms